Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.05□□□□□ -1.44
CDH4P55283 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.05□□□□□ -1.44
CDH4P55283 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH4P55283 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDH4P55283 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH4P55283 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.05□□□□□ -1.44
CDH4P55283 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.05□□□□□ -1.44
CDH4P55283 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH4P55283 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
CDH4P55283 AC005261.2-201ENST00000593427 4258 ntBASIC6.05□□□□□ -1.44
CDH4P55283 WDR95P-201ENST00000425638 1542 ntBASIC6.04□□□□□ -1.44
CDH4P55283 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH4P55283 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CDH4P55283 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH4P55283 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH4P55283 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CDH4P55283 AC073365.1-203ENST00000641055 1992 ntBASIC6.04□□□□□ -1.44
CDH4P55283 AC140479.2-201ENST00000421567 3130 ntBASIC6.04□□□□□ -1.44
CDH4P55283 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH4P55283 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CDH4P55283 OR52B3P-201ENST00000314715 928 ntBASIC6.04□□□□□ -1.44
CDH4P55283 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CDH4P55283 RNA5SP500-201ENST00000364486 119 ntBASIC6.04□□□□□ -1.44
CDH4P55283 RPL23AP17-201ENST00000401064 499 ntBASIC6.04□□□□□ -1.44
CDH4P55283 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH4P55283 IPPKP1-201ENST00000422501 768 ntBASIC6.04□□□□□ -1.44
CDH4P55283 SETP9-201ENST00000423837 832 ntBASIC6.04□□□□□ -1.44
CDH4P55283 AC126120.1-201ENST00000431082 470 ntBASIC6.04□□□□□ -1.44
CDH4P55283 DEFA9P-201ENST00000433042 285 ntBASIC6.04□□□□□ -1.44
CDH4P55283 AL512637.1-201ENST00000439523 1231 ntBASIC6.04□□□□□ -1.44
CDH4P55283 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.04□□□□□ -1.44
CDH4P55283 AP006222.1-205ENST00000450734 457 ntBASIC6.04□□□□□ -1.44
CDH4P55283 TRIM51DP-201ENST00000529746 596 ntBASIC6.04□□□□□ -1.44
CDH4P55283 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.04□□□□□ -1.44
CDH4P55283 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.04□□□□□ -1.44
CDH4P55283 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.04□□□□□ -1.44
CDH4P55283 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.04□□□□□ -1.44
CDH4P55283 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.04□□□□□ -1.44
CDH4P55283 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH4P55283 AC007346.2-201ENST00000564816 892 ntBASIC6.04□□□□□ -1.44
CDH4P55283 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.04□□□□□ -1.44
CDH4P55283 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH4P55283 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH4P55283 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH4P55283 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.04□□□□□ -1.44
CDH4P55283 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.04□□□□□ -1.44
CDH4P55283 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDH4P55283 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH4P55283 AL449283.1-201ENST00000602631 3403 ntBASIC6.04□□□□□ -1.44
CDH4P55283 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDH4P55283 AC005725.1-201ENST00000577346 2607 ntBASIC6.04□□□□□ -1.44
CDH4P55283 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.04□□□□□ -1.44
CDH4P55283 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CDH4P55283 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDH4P55283 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDH4P55283 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH4P55283 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.03□□□□□ -1.44
CDH4P55283 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH4P55283 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDH4P55283 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH4P55283 AC007159.1-201ENST00000566529 4706 ntBASIC6.03□□□□□ -1.44
CDH4P55283 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH4P55283 AC068769.1-201ENST00000474767 2426 ntBASIC6.03□□□□□ -1.44
CDH4P55283 OR7E101P-201ENST00000400428 513 ntBASIC6.03□□□□□ -1.44
CDH4P55283 RPS3AP2-201ENST00000407190 754 ntBASIC6.03□□□□□ -1.44
CDH4P55283 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CDH4P55283 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.03□□□□□ -1.44
CDH4P55283 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.03□□□□□ -1.44
CDH4P55283 AL390879.1-201ENST00000439143 386 ntBASIC6.03□□□□□ -1.44
CDH4P55283 AC023141.8-201ENST00000442554 208 ntBASIC6.03□□□□□ -1.44
CDH4P55283 RPL12P24-201ENST00000474907 486 ntBASIC6.03□□□□□ -1.44
CDH4P55283 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
CDH4P55283 RPL38P3-201ENST00000484463 213 ntBASIC6.03□□□□□ -1.44
CDH4P55283 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.03□□□□□ -1.44
CDH4P55283 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.03□□□□□ -1.44
CDH4P55283 HMGN2P36-201ENST00000529541 409 ntBASIC6.03□□□□□ -1.44
CDH4P55283 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH4P55283 AC079600.1-201ENST00000550326 297 ntBASIC6.03□□□□□ -1.44
CDH4P55283 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.03□□□□□ -1.44
CDH4P55283 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.03□□□□□ -1.44
CDH4P55283 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH4P55283 AC069234.4-201ENST00000621276 412 ntBASIC6.03□□□□□ -1.44
CDH4P55283 AC018659.2-201ENST00000624690 715 ntBASIC6.03□□□□□ -1.44
CDH4P55283 SNX18P12-201ENST00000624821 759 ntBASIC6.03□□□□□ -1.44
CDH4P55283 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH4P55283 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH4P55283 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.03□□□□□ -1.44
CDH4P55283 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH4P55283 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.03□□□□□ -1.44
CDH4P55283 AC090220.1-201ENST00000593078 1699 ntBASIC6.03□□□□□ -1.44
CDH4P55283 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDH4P55283 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CDH4P55283 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDH4P55283 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH4P55283 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.03□□□□□ -1.44
CDH4P55283 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.03□□□□□ -1.44
CDH4P55283 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
CDH4P55283 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CDH4P55283 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDH4P55283 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms