Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.86□□□□□ -1.47
PDX1P52945 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.86□□□□□ -1.47
PDX1P52945 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.86□□□□□ -1.47
PDX1P52945 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.86□□□□□ -1.47
PDX1P52945 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.86□□□□□ -1.47
PDX1P52945 MIR3189-201ENST00000578735 73 ntBASIC5.86□□□□□ -1.47
PDX1P52945 MIR4776-2-201ENST00000580204 80 ntBASIC5.86□□□□□ -1.47
PDX1P52945 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.86□□□□□ -1.47
PDX1P52945 MIR3176-201ENST00000582210 90 ntBASIC5.86□□□□□ -1.47
PDX1P52945 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.86□□□□□ -1.47
PDX1P52945 RN7SL787P-201ENST00000613000 284 ntBASIC5.86□□□□□ -1.47
PDX1P52945 AC107905.1-201ENST00000616204 426 ntBASIC5.86□□□□□ -1.47
PDX1P52945 AL357562.1-201ENST00000624911 609 ntBASIC5.86□□□□□ -1.47
PDX1P52945 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.86□□□□□ -1.47
PDX1P52945 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDX1P52945 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDX1P52945 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.86□□□□□ -1.47
PDX1P52945 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDX1P52945 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PDX1P52945 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDX1P52945 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDX1P52945 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.86□□□□□ -1.47
PDX1P52945 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDX1P52945 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PDX1P52945 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDX1P52945 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDX1P52945 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDX1P52945 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDX1P52945 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDX1P52945 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.85□□□□□ -1.47
PDX1P52945 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDX1P52945 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.85□□□□□ -1.47
PDX1P52945 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDX1P52945 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.85□□□□□ -1.47
PDX1P52945 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDX1P52945 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.85□□□□□ -1.47
PDX1P52945 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PDX1P52945 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PDX1P52945 FUNDC2P3-201ENST00000334716 533 ntBASIC5.85□□□□□ -1.47
PDX1P52945 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.85□□□□□ -1.47
PDX1P52945 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.85□□□□□ -1.47
PDX1P52945 MIR433-201ENST00000384837 93 ntBASIC5.85□□□□□ -1.47
PDX1P52945 RNU11-6P-201ENST00000391127 133 ntBASIC5.85□□□□□ -1.47
PDX1P52945 RPL35AP3-201ENST00000414680 288 ntBASIC5.85□□□□□ -1.47
PDX1P52945 AC016769.2-201ENST00000414815 475 ntBASIC5.85□□□□□ -1.47
PDX1P52945 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.85□□□□□ -1.47
PDX1P52945 RPS17P17-201ENST00000419392 409 ntBASIC5.85□□□□□ -1.47
PDX1P52945 GAPDHP48-201ENST00000436626 961 ntBASIC5.85□□□□□ -1.47
PDX1P52945 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.85□□□□□ -1.47
PDX1P52945 OR13K1P-201ENST00000444577 975 ntBASIC5.85□□□□□ -1.47
PDX1P52945 AL512593.1-201ENST00000444758 779 ntBASIC5.85□□□□□ -1.47
PDX1P52945 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.85□□□□□ -1.47
PDX1P52945 RPS27AP3-201ENST00000453803 454 ntBASIC5.85□□□□□ -1.47
PDX1P52945 RPSAP39-201ENST00000467439 883 ntBASIC5.85□□□□□ -1.47
PDX1P52945 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.85□□□□□ -1.47
PDX1P52945 AC092865.4-201ENST00000477936 615 ntBASIC5.85□□□□□ -1.47
PDX1P52945 AC124945.1-201ENST00000485133 188 ntBASIC5.85□□□□□ -1.47
PDX1P52945 AOX3P-204ENST00000491025 2107 ntBASIC5.85□□□□□ -1.47
PDX1P52945 AL133372.1-201ENST00000493565 745 ntBASIC5.85□□□□□ -1.47
PDX1P52945 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.85□□□□□ -1.47
PDX1P52945 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.85□□□□□ -1.47
PDX1P52945 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.85□□□□□ -1.47
PDX1P52945 RPL7L1P4-201ENST00000513004 707 ntBASIC5.85□□□□□ -1.47
PDX1P52945 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDX1P52945 SNORD116-30-201ENST00000516468 85 ntBASIC5.85□□□□□ -1.47
PDX1P52945 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.85□□□□□ -1.47
PDX1P52945 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.85□□□□□ -1.47
PDX1P52945 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.85□□□□□ -1.47
PDX1P52945 AC110056.1-201ENST00000525759 911 ntBASIC5.85□□□□□ -1.47
PDX1P52945 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.85□□□□□ -1.47
PDX1P52945 MIR4443-201ENST00000585052 53 ntBASIC5.85□□□□□ -1.47
PDX1P52945 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDX1P52945 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDX1P52945 AL021368.3-201ENST00000607119 578 ntBASIC5.85□□□□□ -1.47
PDX1P52945 MIR6826-201ENST00000617808 98 ntBASIC5.85□□□□□ -1.47
PDX1P52945 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.85□□□□□ -1.47
PDX1P52945 AL049767.1-202ENST00000637826 242 ntBASIC5.85□□□□□ -1.47
PDX1P52945 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PDX1P52945 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
PDX1P52945 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.85□□□□□ -1.47
PDX1P52945 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.85□□□□□ -1.47
PDX1P52945 AC079753.1-201ENST00000623243 3868 ntBASIC5.85□□□□□ -1.47
PDX1P52945 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDX1P52945 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
PDX1P52945 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDX1P52945 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDX1P52945 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
PDX1P52945 SHQ1P1-201ENST00000437111 1544 ntBASIC5.84□□□□□ -1.47
PDX1P52945 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDX1P52945 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDX1P52945 AC106872.5-201ENST00000508856 1416 ntBASIC5.84□□□□□ -1.47
PDX1P52945 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDX1P52945 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDX1P52945 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDX1P52945 RNA5SP500-201ENST00000364486 119 ntBASIC5.84□□□□□ -1.47
PDX1P52945 TRAV35-201ENST00000390462 330 ntBASIC5.84□□□□□ -1.47
PDX1P52945 AL096829.1-201ENST00000413677 457 ntBASIC5.84□□□□□ -1.47
PDX1P52945 MTND4LP17-201ENST00000414607 293 ntBASIC5.84□□□□□ -1.47
PDX1P52945 AC245884.2-201ENST00000426257 404 ntBASIC5.84□□□□□ -1.47
PDX1P52945 KATNBL1P2-201ENST00000433311 835 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms