Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
MSH6P52701 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
MSH6P52701 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
MSH6P52701 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC8.14□□□□□ -1.11
MSH6P52701 AC099677.3-201ENST00000427081 395 ntBASIC8.14□□□□□ -1.11
MSH6P52701 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC8.14□□□□□ -1.11
MSH6P52701 CYCSP6-201ENST00000434498 302 ntBASIC8.14□□□□□ -1.11
MSH6P52701 FABP5P2-201ENST00000439042 408 ntBASIC8.14□□□□□ -1.11
MSH6P52701 AC009220.1-201ENST00000451614 275 ntBASIC8.14□□□□□ -1.11
MSH6P52701 AL672167.3-201ENST00000465951 960 ntBASIC8.14□□□□□ -1.11
MSH6P52701 RN7SL51P-201ENST00000468230 285 ntBASIC8.14□□□□□ -1.11
MSH6P52701 AC090638.1-201ENST00000498296 909 ntBASIC8.14□□□□□ -1.11
MSH6P52701 AC073581.1-201ENST00000519036 575 ntBASIC8.14□□□□□ -1.11
MSH6P52701 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC8.14□□□□□ -1.11
MSH6P52701 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
MSH6P52701 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
MSH6P52701 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC8.14□□□□□ -1.11
MSH6P52701 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC8.14□□□□□ -1.11
MSH6P52701 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC8.14□□□□□ -1.11
MSH6P52701 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC8.14□□□□□ -1.11
MSH6P52701 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
MSH6P52701 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
MSH6P52701 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
MSH6P52701 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC8.14□□□□□ -1.11
MSH6P52701 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
MSH6P52701 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
MSH6P52701 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
MSH6P52701 CR1-203ENST00000367051 7469 ntTSL 5 BASIC8.14□□□□□ -1.11
MSH6P52701 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC8.14□□□□□ -1.11
MSH6P52701 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC8.14□□□□□ -1.11
MSH6P52701 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
MSH6P52701 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC8.14□□□□□ -1.11
MSH6P52701 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC8.13□□□□□ -1.11
MSH6P52701 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
MSH6P52701 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
MSH6P52701 AC005294.1-201ENST00000355509 281 ntBASIC8.13□□□□□ -1.11
MSH6P52701 MRRF-207ENST00000373729 870 ntTSL 3 BASIC8.13□□□□□ -1.11
MSH6P52701 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC8.13□□□□□ -1.11
MSH6P52701 GAPDHP42-201ENST00000406848 981 ntBASIC8.13□□□□□ -1.11
MSH6P52701 GABARAPL3-201ENST00000412799 354 ntBASIC8.13□□□□□ -1.11
MSH6P52701 RPS26P13-201ENST00000419030 330 ntBASIC8.13□□□□□ -1.11
MSH6P52701 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC8.13□□□□□ -1.11
MSH6P52701 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC8.13□□□□□ -1.11
MSH6P52701 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC8.13□□□□□ -1.11
MSH6P52701 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC8.13□□□□□ -1.11
MSH6P52701 GSTA7P-201ENST00000438425 448 ntBASIC8.13□□□□□ -1.11
MSH6P52701 EIF4EBP2P1-201ENST00000450009 343 ntBASIC8.13□□□□□ -1.11
MSH6P52701 RPS29P22-201ENST00000472363 168 ntBASIC8.13□□□□□ -1.11
MSH6P52701 RPL7P6-201ENST00000480903 738 ntBASIC8.13□□□□□ -1.11
MSH6P52701 AC007686.1-201ENST00000488511 463 ntBASIC8.13□□□□□ -1.11
MSH6P52701 AC093267.1-201ENST00000489176 961 ntBASIC8.13□□□□□ -1.11
MSH6P52701 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC8.13□□□□□ -1.11
MSH6P52701 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC8.13□□□□□ -1.11
MSH6P52701 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC8.13□□□□□ -1.11
MSH6P52701 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC8.13□□□□□ -1.11
MSH6P52701 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
MSH6P52701 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC8.13□□□□□ -1.11
MSH6P52701 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC8.13□□□□□ -1.11
MSH6P52701 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.13□□□□□ -1.11
MSH6P52701 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC8.13□□□□□ -1.11
MSH6P52701 PPATP2-201ENST00000605635 508 ntBASIC8.13□□□□□ -1.11
MSH6P52701 AC126915.2-201ENST00000610957 190 ntBASIC8.13□□□□□ -1.11
MSH6P52701 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
MSH6P52701 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
MSH6P52701 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC8.13□□□□□ -1.11
MSH6P52701 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
MSH6P52701 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC8.13□□□□□ -1.11
MSH6P52701 PABPC1P8-201ENST00000452851 2086 ntBASIC8.13□□□□□ -1.11
MSH6P52701 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
MSH6P52701 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
MSH6P52701 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
MSH6P52701 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
MSH6P52701 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC8.13□□□□□ -1.11
MSH6P52701 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
MSH6P52701 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC8.12□□□□□ -1.11
MSH6P52701 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC8.12□□□□□ -1.11
MSH6P52701 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
MSH6P52701 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
MSH6P52701 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC8.12□□□□□ -1.11
MSH6P52701 RNU1-106P-201ENST00000384382 164 ntBASIC8.12□□□□□ -1.11
MSH6P52701 AL451136.1-201ENST00000435399 325 ntBASIC8.12□□□□□ -1.11
MSH6P52701 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
MSH6P52701 RPS26P41-201ENST00000450370 284 ntBASIC8.12□□□□□ -1.11
MSH6P52701 AL157777.1-201ENST00000468100 304 ntBASIC8.12□□□□□ -1.11
MSH6P52701 AC087672.1-201ENST00000479876 766 ntBASIC8.12□□□□□ -1.11
MSH6P52701 RPL32P33-201ENST00000487023 394 ntBASIC8.12□□□□□ -1.11
MSH6P52701 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC8.12□□□□□ -1.11
MSH6P52701 AL671862.1-201ENST00000515851 349 ntBASIC8.12□□□□□ -1.11
MSH6P52701 RN7SKP98-201ENST00000517070 156 ntBASIC8.12□□□□□ -1.11
MSH6P52701 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC8.12□□□□□ -1.11
MSH6P52701 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
MSH6P52701 PARP4P1-201ENST00000435945 2337 ntBASIC8.12□□□□□ -1.11
MSH6P52701 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
MSH6P52701 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC8.12□□□□□ -1.11
MSH6P52701 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
MSH6P52701 PRNCR1-201ENST00000635449 12727 ntBASIC8.12□□□□□ -1.11
MSH6P52701 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
MSH6P52701 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
MSH6P52701 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.12□□□□□ -1.11
MSH6P52701 BRD7P6-201ENST00000431406 1860 ntBASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms