Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
MRE11P49959 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
MRE11P49959 SNORA70.5-201ENST00000365519 135 ntBASIC7.35□□□□□ -1.23
MRE11P49959 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
MRE11P49959 RNA5SP53-201ENST00000391299 120 ntBASIC7.35□□□□□ -1.23
MRE11P49959 RN7SKP151-201ENST00000410230 316 ntBASIC7.35□□□□□ -1.23
MRE11P49959 RN7SKP278-201ENST00000410504 342 ntBASIC7.35□□□□□ -1.23
MRE11P49959 U3.43-201ENST00000410734 213 ntBASIC7.35□□□□□ -1.23
MRE11P49959 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC7.35□□□□□ -1.23
MRE11P49959 VDAC1P10-201ENST00000416715 891 ntBASIC7.35□□□□□ -1.23
MRE11P49959 AC079355.1-201ENST00000421770 223 ntBASIC7.35□□□□□ -1.23
MRE11P49959 AC104843.2-201ENST00000427666 297 ntBASIC7.35□□□□□ -1.23
MRE11P49959 MTND4LP7-201ENST00000431728 294 ntBASIC7.35□□□□□ -1.23
MRE11P49959 DNAJA1P5-201ENST00000440278 943 ntBASIC7.35□□□□□ -1.23
MRE11P49959 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC7.35□□□□□ -1.23
MRE11P49959 AC005017.1-201ENST00000482002 490 ntBASIC7.35□□□□□ -1.23
MRE11P49959 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC7.35□□□□□ -1.23
MRE11P49959 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC7.35□□□□□ -1.23
MRE11P49959 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC7.35□□□□□ -1.23
MRE11P49959 HSD3BP3-201ENST00000514706 994 ntBASIC7.35□□□□□ -1.23
MRE11P49959 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.35□□□□□ -1.23
MRE11P49959 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.35□□□□□ -1.23
MRE11P49959 OR5M6P-201ENST00000530227 937 ntBASIC7.35□□□□□ -1.23
MRE11P49959 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.35□□□□□ -1.23
MRE11P49959 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC7.35□□□□□ -1.23
MRE11P49959 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.35□□□□□ -1.23
MRE11P49959 AC016180.1-201ENST00000567945 403 ntBASIC7.35□□□□□ -1.23
MRE11P49959 MIR3614-201ENST00000581261 86 ntBASIC7.35□□□□□ -1.23
MRE11P49959 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
MRE11P49959 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.35□□□□□ -1.23
MRE11P49959 AC092944.2-201ENST00000605443 889 ntBASIC7.35□□□□□ -1.23
MRE11P49959 MIR6768-201ENST00000610734 72 ntBASIC7.35□□□□□ -1.23
MRE11P49959 AL512624.1-201ENST00000613638 469 ntBASIC7.35□□□□□ -1.23
MRE11P49959 SNX18P12-201ENST00000624821 759 ntBASIC7.35□□□□□ -1.23
MRE11P49959 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
MRE11P49959 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
MRE11P49959 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.35□□□□□ -1.23
MRE11P49959 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
MRE11P49959 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
MRE11P49959 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.35□□□□□ -1.23
MRE11P49959 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
MRE11P49959 AC109446.4-201ENST00000623235 2755 ntBASIC7.35□□□□□ -1.23
MRE11P49959 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC7.35□□□□□ -1.23
MRE11P49959 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.35□□□□□ -1.23
MRE11P49959 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.35□□□□□ -1.23
MRE11P49959 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
MRE11P49959 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
MRE11P49959 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MRE11P49959 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC7.34□□□□□ -1.23
MRE11P49959 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
MRE11P49959 OR7E25P-201ENST00000344844 931 ntBASIC7.34□□□□□ -1.23
MRE11P49959 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
MRE11P49959 RN7SKP296-201ENST00000411185 341 ntBASIC7.34□□□□□ -1.23
MRE11P49959 EIF4A1P13-201ENST00000415667 230 ntBASIC7.34□□□□□ -1.23
MRE11P49959 UBE2V1P14-201ENST00000415815 558 ntBASIC7.34□□□□□ -1.23
MRE11P49959 RPS7P12-201ENST00000422385 582 ntBASIC7.34□□□□□ -1.23
MRE11P49959 KIF4CP-201ENST00000422742 1279 ntBASIC7.34□□□□□ -1.23
MRE11P49959 AL354766.1-201ENST00000423396 542 ntBASIC7.34□□□□□ -1.23
MRE11P49959 AC009518.3-201ENST00000438972 253 ntBASIC7.34□□□□□ -1.23
MRE11P49959 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC7.34□□□□□ -1.23
MRE11P49959 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC7.34□□□□□ -1.23
MRE11P49959 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
MRE11P49959 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC7.34□□□□□ -1.23
MRE11P49959 RPS27AP3-201ENST00000453803 454 ntBASIC7.34□□□□□ -1.23
MRE11P49959 AC068587.2-201ENST00000478386 781 ntBASIC7.34□□□□□ -1.23
MRE11P49959 AC025768.1-201ENST00000510057 267 ntBASIC7.34□□□□□ -1.23
MRE11P49959 RNA5SP518-201ENST00000515957 119 ntBASIC7.34□□□□□ -1.23
MRE11P49959 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC7.34□□□□□ -1.23
MRE11P49959 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.34□□□□□ -1.23
MRE11P49959 OR9G2P-201ENST00000533326 880 ntBASIC7.34□□□□□ -1.23
MRE11P49959 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC7.34□□□□□ -1.23
MRE11P49959 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC7.34□□□□□ -1.23
MRE11P49959 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MRE11P49959 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC7.34□□□□□ -1.23
MRE11P49959 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.34□□□□□ -1.23
MRE11P49959 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.34□□□□□ -1.23
MRE11P49959 AC013244.3-201ENST00000605614 388 ntBASIC7.34□□□□□ -1.23
MRE11P49959 AC097065.2-201ENST00000608159 533 ntBASIC7.34□□□□□ -1.23
MRE11P49959 AC005277.2-201ENST00000617898 390 ntBASIC7.34□□□□□ -1.23
MRE11P49959 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.34□□□□□ -1.23
MRE11P49959 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
MRE11P49959 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
MRE11P49959 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
MRE11P49959 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MRE11P49959 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.24
MRE11P49959 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.33□□□□□ -1.24
MRE11P49959 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
MRE11P49959 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
MRE11P49959 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
MRE11P49959 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
MRE11P49959 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.33□□□□□ -1.24
MRE11P49959 RNA5SP453-201ENST00000362503 119 ntBASIC7.33□□□□□ -1.24
MRE11P49959 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
MRE11P49959 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
MRE11P49959 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC7.33□□□□□ -1.24
MRE11P49959 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC7.33□□□□□ -1.24
MRE11P49959 AC018804.1-201ENST00000430381 618 ntBASIC7.33□□□□□ -1.24
MRE11P49959 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC7.33□□□□□ -1.24
MRE11P49959 AC007679.3-201ENST00000434035 414 ntBASIC7.33□□□□□ -1.24
MRE11P49959 AC110602.1-201ENST00000437414 318 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms