Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CR1P49238 NPM1P37-201ENST00000403105 874 ntBASIC5.19□□□□□ -1.58
CX3CR1P49238 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.19□□□□□ -1.58
CX3CR1P49238 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.19□□□□□ -1.58
CX3CR1P49238 AL139158.1-201ENST00000424719 340 ntBASIC5.19□□□□□ -1.58
CX3CR1P49238 NPM1P48-201ENST00000436002 853 ntBASIC5.19□□□□□ -1.58
CX3CR1P49238 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CX3CR1P49238 AC044810.1-201ENST00000480271 711 ntBASIC5.19□□□□□ -1.58
CX3CR1P49238 RN7SL362P-201ENST00000494228 267 ntBASIC5.19□□□□□ -1.58
CX3CR1P49238 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CR1P49238 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.19□□□□□ -1.58
CX3CR1P49238 AC008629.2-201ENST00000503783 483 ntBASIC5.19□□□□□ -1.58
CX3CR1P49238 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.19□□□□□ -1.58
CX3CR1P49238 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.19□□□□□ -1.58
CX3CR1P49238 RN7SKP5-201ENST00000517045 272 ntBASIC5.19□□□□□ -1.58
CX3CR1P49238 AC116917.1-201ENST00000520558 305 ntBASIC5.19□□□□□ -1.58
CX3CR1P49238 OR4A42P-201ENST00000531397 938 ntBASIC5.19□□□□□ -1.58
CX3CR1P49238 AC090424.1-201ENST00000535243 736 ntBASIC5.19□□□□□ -1.58
CX3CR1P49238 BTG1P1-201ENST00000540396 508 ntBASIC5.19□□□□□ -1.58
CX3CR1P49238 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.19□□□□□ -1.58
CX3CR1P49238 MIR4701-201ENST00000583094 63 ntBASIC5.19□□□□□ -1.58
CX3CR1P49238 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.19□□□□□ -1.58
CX3CR1P49238 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.19□□□□□ -1.58
CX3CR1P49238 AC073389.3-201ENST00000609434 935 ntBASIC5.19□□□□□ -1.58
CX3CR1P49238 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.19□□□□□ -1.58
CX3CR1P49238 AL355974.3-201ENST00000617383 467 ntBASIC5.19□□□□□ -1.58
CX3CR1P49238 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.19□□□□□ -1.58
CX3CR1P49238 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
CX3CR1P49238 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CX3CR1P49238 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CR1P49238 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CR1P49238 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CR1P49238 GNL2P1-201ENST00000451274 2190 ntBASIC5.19□□□□□ -1.58
CX3CR1P49238 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.19□□□□□ -1.58
CX3CR1P49238 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CR1P49238 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CR1P49238 AC027279.4-201ENST00000624371 2072 ntBASIC5.19□□□□□ -1.58
CX3CR1P49238 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.19□□□□□ -1.58
CX3CR1P49238 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CX3CR1P49238 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CX3CR1P49238 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CX3CR1P49238 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.18□□□□□ -1.58
CX3CR1P49238 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CX3CR1P49238 AC116158.1-201ENST00000560231 2129 ntBASIC5.18□□□□□ -1.58
CX3CR1P49238 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.18□□□□□ -1.58
CX3CR1P49238 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.18□□□□□ -1.58
CX3CR1P49238 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.18□□□□□ -1.58
CX3CR1P49238 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CX3CR1P49238 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CX3CR1P49238 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CX3CR1P49238 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CX3CR1P49238 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CX3CR1P49238 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
CX3CR1P49238 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.18□□□□□ -1.58
CX3CR1P49238 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CX3CR1P49238 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CX3CR1P49238 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CX3CR1P49238 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CX3CR1P49238 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CX3CR1P49238 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.18□□□□□ -1.58
CX3CR1P49238 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.18□□□□□ -1.58
CX3CR1P49238 AL158827.1-201ENST00000416300 391 ntBASIC5.18□□□□□ -1.58
CX3CR1P49238 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.18□□□□□ -1.58
CX3CR1P49238 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.18□□□□□ -1.58
CX3CR1P49238 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.18□□□□□ -1.58
CX3CR1P49238 GAPDHP75-201ENST00000433910 943 ntBASIC5.18□□□□□ -1.58
CX3CR1P49238 GAPDHP59-201ENST00000435908 267 ntBASIC5.18□□□□□ -1.58
CX3CR1P49238 AC023141.3-201ENST00000436698 278 ntBASIC5.18□□□□□ -1.58
CX3CR1P49238 RPS7P3-201ENST00000443360 580 ntBASIC5.18□□□□□ -1.58
CX3CR1P49238 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.18□□□□□ -1.58
CX3CR1P49238 AC112484.3-201ENST00000505910 329 ntBASIC5.18□□□□□ -1.58
CX3CR1P49238 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.18□□□□□ -1.58
CX3CR1P49238 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.18□□□□□ -1.58
CX3CR1P49238 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.18□□□□□ -1.58
CX3CR1P49238 AC110056.1-201ENST00000525759 911 ntBASIC5.18□□□□□ -1.58
CX3CR1P49238 OR8Q1P-201ENST00000526467 655 ntBASIC5.18□□□□□ -1.58
CX3CR1P49238 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.18□□□□□ -1.58
CX3CR1P49238 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CX3CR1P49238 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.18□□□□□ -1.58
CX3CR1P49238 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.18□□□□□ -1.58
CX3CR1P49238 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.18□□□□□ -1.58
CX3CR1P49238 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.18□□□□□ -1.58
CX3CR1P49238 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.18□□□□□ -1.58
CX3CR1P49238 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.18□□□□□ -1.58
CX3CR1P49238 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.18□□□□□ -1.58
CX3CR1P49238 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.18□□□□□ -1.58
CX3CR1P49238 AC011500.1-201ENST00000601963 469 ntBASIC5.18□□□□□ -1.58
CX3CR1P49238 RPL12P48-201ENST00000605620 304 ntBASIC5.18□□□□□ -1.58
CX3CR1P49238 AC005828.7-201ENST00000607331 556 ntBASIC5.18□□□□□ -1.58
CX3CR1P49238 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.18□□□□□ -1.58
CX3CR1P49238 AL445670.1-201ENST00000618889 801 ntBASIC5.18□□□□□ -1.58
CX3CR1P49238 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.18□□□□□ -1.58
CX3CR1P49238 MIR6813-201ENST00000621638 56 ntBASIC5.18□□□□□ -1.58
CX3CR1P49238 AC099654.15-201ENST00000639802 509 ntBASIC5.18□□□□□ -1.58
CX3CR1P49238 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CX3CR1P49238 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CX3CR1P49238 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CX3CR1P49238 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CX3CR1P49238 AL442128.2-201ENST00000620246 1824 ntBASIC5.18□□□□□ -1.58
CX3CR1P49238 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms