Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.4□□□□□ -1.38
SSR1P43307 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.4□□□□□ -1.38
SSR1P43307 AC234781.4-201ENST00000419384 244 ntBASIC6.4□□□□□ -1.38
SSR1P43307 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.4□□□□□ -1.38
SSR1P43307 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.4□□□□□ -1.38
SSR1P43307 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.4□□□□□ -1.38
SSR1P43307 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.4□□□□□ -1.38
SSR1P43307 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
SSR1P43307 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.4□□□□□ -1.38
SSR1P43307 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.4□□□□□ -1.38
SSR1P43307 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.4□□□□□ -1.38
SSR1P43307 H3F3AP5-201ENST00000475267 429 ntBASIC6.4□□□□□ -1.38
SSR1P43307 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SSR1P43307 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.4□□□□□ -1.38
SSR1P43307 AC095052.1-201ENST00000509955 863 ntBASIC6.4□□□□□ -1.38
SSR1P43307 SNX18P25-201ENST00000510539 758 ntBASIC6.4□□□□□ -1.38
SSR1P43307 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SSR1P43307 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
SSR1P43307 MIR3157-201ENST00000578688 85 ntBASIC6.4□□□□□ -1.38
SSR1P43307 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.4□□□□□ -1.38
SSR1P43307 AC073575.2-201ENST00000614212 627 ntBASIC6.4□□□□□ -1.38
SSR1P43307 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.4□□□□□ -1.38
SSR1P43307 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.4□□□□□ -1.38
SSR1P43307 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SSR1P43307 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.4□□□□□ -1.38
SSR1P43307 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
SSR1P43307 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSR1P43307 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSR1P43307 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SSR1P43307 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
SSR1P43307 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSR1P43307 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSR1P43307 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SSR1P43307 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.39□□□□□ -1.39
SSR1P43307 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
SSR1P43307 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSR1P43307 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSR1P43307 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSR1P43307 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSR1P43307 AL096800.1-201ENST00000405326 893 ntBASIC6.39□□□□□ -1.39
SSR1P43307 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.39□□□□□ -1.39
SSR1P43307 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.39□□□□□ -1.39
SSR1P43307 IGLV3-4-201ENST00000432300 244 ntBASIC6.39□□□□□ -1.39
SSR1P43307 AL365220.1-201ENST00000432923 399 ntBASIC6.39□□□□□ -1.39
SSR1P43307 LINC00328-2P-201ENST00000436585 219 ntBASIC6.39□□□□□ -1.39
SSR1P43307 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.39□□□□□ -1.39
SSR1P43307 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSR1P43307 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.39□□□□□ -1.39
SSR1P43307 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.39□□□□□ -1.39
SSR1P43307 AC114728.1-201ENST00000488289 483 ntBASIC6.39□□□□□ -1.39
SSR1P43307 SNRPCP11-201ENST00000492453 205 ntBASIC6.39□□□□□ -1.39
SSR1P43307 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.39□□□□□ -1.39
SSR1P43307 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSR1P43307 CYP4F27P-201ENST00000514557 494 ntBASIC6.39□□□□□ -1.39
SSR1P43307 AC021269.1-201ENST00000526860 705 ntBASIC6.39□□□□□ -1.39
SSR1P43307 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC6.39□□□□□ -1.39
SSR1P43307 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.39□□□□□ -1.39
SSR1P43307 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.39□□□□□ -1.39
SSR1P43307 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSR1P43307 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.39□□□□□ -1.39
SSR1P43307 AC012676.3-201ENST00000614983 479 ntBASIC6.39□□□□□ -1.39
SSR1P43307 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSR1P43307 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.39□□□□□ -1.39
SSR1P43307 MIR6823-201ENST00000622118 61 ntBASIC6.39□□□□□ -1.39
SSR1P43307 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.39□□□□□ -1.39
SSR1P43307 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.39□□□□□ -1.39
SSR1P43307 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.39□□□□□ -1.39
SSR1P43307 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.39□□□□□ -1.39
SSR1P43307 BTBD10P1-201ENST00000549824 1352 ntBASIC6.39□□□□□ -1.39
SSR1P43307 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSR1P43307 AC018717.1-201ENST00000457712 1505 ntBASIC6.39□□□□□ -1.39
SSR1P43307 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.39□□□□□ -1.39
SSR1P43307 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSR1P43307 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSR1P43307 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSR1P43307 ZNF101P1-201ENST00000435701 1720 ntBASIC6.39□□□□□ -1.39
SSR1P43307 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSR1P43307 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSR1P43307 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
SSR1P43307 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.38□□□□□ -1.39
SSR1P43307 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSR1P43307 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SSR1P43307 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SSR1P43307 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSR1P43307 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.38□□□□□ -1.39
SSR1P43307 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.38□□□□□ -1.39
SSR1P43307 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.38□□□□□ -1.39
SSR1P43307 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SSR1P43307 OR10R3P-201ENST00000361688 942 ntBASIC6.38□□□□□ -1.39
SSR1P43307 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.38□□□□□ -1.39
SSR1P43307 SNORA5.1-201ENST00000384275 131 ntBASIC6.38□□□□□ -1.39
SSR1P43307 AL132875.1-201ENST00000403623 949 ntBASIC6.38□□□□□ -1.39
SSR1P43307 AL133260.1-201ENST00000405720 405 ntBASIC6.38□□□□□ -1.39
SSR1P43307 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.38□□□□□ -1.39
SSR1P43307 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.38□□□□□ -1.39
SSR1P43307 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.38□□□□□ -1.39
SSR1P43307 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
SSR1P43307 ARMC4P1-201ENST00000438905 707 ntBASIC6.38□□□□□ -1.39
SSR1P43307 RPL23AP60-201ENST00000450011 454 ntBASIC6.38□□□□□ -1.39
SSR1P43307 ACA64.4-201ENST00000459070 127 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms