Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 HDAC1P1-201ENST00000455482 1445 ntBASIC6.48□□□□□ -1.37
HOXC12P31275 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC12P31275 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC12P31275 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
HOXC12P31275 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC12P31275 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
HOXC12P31275 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
HOXC12P31275 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HOXC12P31275 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXC12P31275 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC12P31275 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC12P31275 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC12P31275 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC12P31275 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HOXC12P31275 AC090643.1-201ENST00000623600 3100 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HOXC12P31275 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXC12P31275 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
HOXC12P31275 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
HOXC12P31275 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
HOXC12P31275 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXC12P31275 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 AC023886.2-201ENST00000321285 411 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 RN7SKP36-201ENST00000363997 312 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 U3.14-201ENST00000365363 227 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HOXC12P31275 SNORA68-201ENST00000384437 133 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HOXC12P31275 NUDT19P3-201ENST00000404698 555 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 AL355375.1-201ENST00000405686 392 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 MOB4-205ENST00000409916 829 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXC12P31275 Y_RNA.619-201ENST00000410951 90 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXC12P31275 AL360013.1-201ENST00000419031 858 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXC12P31275 RPL24P2-201ENST00000421023 475 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 FAM183DP-201ENST00000421987 399 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 IFNNP1-201ENST00000429219 553 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXC12P31275 MTCYBP34-201ENST00000439552 670 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXC12P31275 AL356121.1-201ENST00000442911 156 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXC12P31275 AC005002.1-201ENST00000447458 540 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXC12P31275 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXC12P31275 AC097262.1-201ENST00000452559 548 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXC12P31275 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.47□□□□□ -1.37
HOXC12P31275 AC040975.1-201ENST00000472104 316 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 AC084878.1-201ENST00000480555 648 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC12P31275 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.47□□□□□ -1.37
HOXC12P31275 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC12P31275 AC108120.1-201ENST00000506543 991 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 MTND3P5-201ENST00000512798 333 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXC12P31275 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.47□□□□□ -1.37
HOXC12P31275 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXC12P31275 PDCL3P1-201ENST00000534575 734 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 AC068305.2-201ENST00000550567 1205 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 OR11H3P-201ENST00000554547 982 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXC12P31275 AL109628.1-201ENST00000556877 366 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 UBE2CP1-201ENST00000557130 554 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
HOXC12P31275 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXC12P31275 EIF4A2P1-201ENST00000587313 1063 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC12P31275 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC12P31275 RN7SL778P-201ENST00000607160 297 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXC12P31275 AC007494.3-201ENST00000624660 743 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.47□□□□□ -1.37
HOXC12P31275 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXC12P31275 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
HOXC12P31275 AL442128.2-201ENST00000620246 1824 ntBASIC6.47□□□□□ -1.37
HOXC12P31275 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
HOXC12P31275 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.47□□□□□ -1.37
HOXC12P31275 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC12P31275 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms