Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC8.42□□□□□ -1.06
PTPRMP28827 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTPRMP28827 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
PTPRMP28827 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PTPRMP28827 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTPRMP28827 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTPRMP28827 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTPRMP28827 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
PTPRMP28827 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTPRMP28827 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTPRMP28827 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PTPRMP28827 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC8.41□□□□□ -1.06
PTPRMP28827 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTPRMP28827 AC007998.4-201ENST00000612496 2533 ntBASIC8.41□□□□□ -1.06
PTPRMP28827 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTPRMP28827 GNAS-202ENST00000306090 477 ntTSL 5 BASIC8.41□□□□□ -1.06
PTPRMP28827 RPL32P3-201ENST00000359025 275 ntBASIC8.41□□□□□ -1.06
PTPRMP28827 RNU1-43P-201ENST00000365052 165 ntBASIC8.41□□□□□ -1.06
PTPRMP28827 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC8.41□□□□□ -1.06
PTPRMP28827 CREM-230ENST00000474931 626 ntTSL 2 BASIC8.41□□□□□ -1.06
PTPRMP28827 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC8.41□□□□□ -1.06
PTPRMP28827 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC8.41□□□□□ -1.06
PTPRMP28827 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC8.41□□□□□ -1.06
PTPRMP28827 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC8.41□□□□□ -1.06
PTPRMP28827 BLZF2P-201ENST00000553776 1130 ntBASIC8.41□□□□□ -1.06
PTPRMP28827 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC8.41□□□□□ -1.06
PTPRMP28827 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
PTPRMP28827 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC8.41□□□□□ -1.06
PTPRMP28827 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
PTPRMP28827 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PTPRMP28827 AC105749.1-201ENST00000631338 2008 ntBASIC8.41□□□□□ -1.06
PTPRMP28827 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PTPRMP28827 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTPRMP28827 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTPRMP28827 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PTPRMP28827 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PTPRMP28827 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTPRMP28827 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTPRMP28827 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
PTPRMP28827 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PTPRMP28827 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTPRMP28827 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PTPRMP28827 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
PTPRMP28827 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
PTPRMP28827 MIR133B-201ENST00000362210 119 ntBASIC8.4□□□□□ -1.06
PTPRMP28827 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PTPRMP28827 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PTPRMP28827 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC8.4□□□□□ -1.06
PTPRMP28827 PTCD2P2-201ENST00000415579 1095 ntBASIC8.4□□□□□ -1.06
PTPRMP28827 AC019050.1-201ENST00000418508 492 ntBASIC8.4□□□□□ -1.06
PTPRMP28827 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC8.4□□□□□ -1.06
PTPRMP28827 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC8.4□□□□□ -1.06
PTPRMP28827 AC091180.1-201ENST00000462104 372 ntBASIC8.4□□□□□ -1.06
PTPRMP28827 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC8.4□□□□□ -1.06
PTPRMP28827 RN7SKP147-201ENST00000517154 244 ntBASIC8.4□□□□□ -1.06
PTPRMP28827 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC8.4□□□□□ -1.06
PTPRMP28827 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC8.4□□□□□ -1.06
PTPRMP28827 OR4A40P-201ENST00000533878 948 ntBASIC8.4□□□□□ -1.06
PTPRMP28827 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC8.4□□□□□ -1.06
PTPRMP28827 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC8.4□□□□□ -1.06
PTPRMP28827 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC8.4□□□□□ -1.06
PTPRMP28827 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC8.4□□□□□ -1.06
PTPRMP28827 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC8.4□□□□□ -1.06
PTPRMP28827 RPL27-207ENST00000590864 569 ntTSL 2 BASIC8.4□□□□□ -1.06
PTPRMP28827 AC090527.3-201ENST00000619041 548 ntBASIC8.4□□□□□ -1.06
PTPRMP28827 AC130448.2-201ENST00000624082 374 ntBASIC8.4□□□□□ -1.06
PTPRMP28827 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC8.4□□□□□ -1.06
PTPRMP28827 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
PTPRMP28827 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PTPRMP28827 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PTPRMP28827 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC8.4□□□□□ -1.06
PTPRMP28827 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
PTPRMP28827 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PTPRMP28827 CASC19-221ENST00000641309 1382 ntBASIC8.4□□□□□ -1.06
PTPRMP28827 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PTPRMP28827 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PTPRMP28827 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
PTPRMP28827 INTS6P1-201ENST00000504674 2530 ntBASIC8.4□□□□□ -1.07
PTPRMP28827 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
PTPRMP28827 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.4□□□□□ -1.07
PTPRMP28827 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
PTPRMP28827 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC8.4□□□□□ -1.07
PTPRMP28827 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PTPRMP28827 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
PTPRMP28827 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC8.4□□□□□ -1.07
PTPRMP28827 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PTPRMP28827 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PTPRMP28827 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PTPRMP28827 SNORA67-201ENST00000384423 137 ntBASIC8.39□□□□□ -1.07
PTPRMP28827 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC8.39□□□□□ -1.07
PTPRMP28827 RPL17P36-201ENST00000420302 549 ntBASIC8.39□□□□□ -1.07
PTPRMP28827 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC8.39□□□□□ -1.07
PTPRMP28827 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
PTPRMP28827 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC8.39□□□□□ -1.07
PTPRMP28827 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC8.39□□□□□ -1.07
PTPRMP28827 OR5AN2P-201ENST00000534535 896 ntBASIC8.39□□□□□ -1.07
PTPRMP28827 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
PTPRMP28827 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC8.39□□□□□ -1.07
PTPRMP28827 OR4H6P-201ENST00000563771 921 ntBASIC8.39□□□□□ -1.07
PTPRMP28827 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms