Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC7.95□□□□□ -1.14
ERCC3P19447 U6.48-201ENST00000618523 106 ntBASIC7.95□□□□□ -1.14
ERCC3P19447 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.95□□□□□ -1.14
ERCC3P19447 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.95□□□□□ -1.14
ERCC3P19447 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC7.95□□□□□ -1.14
ERCC3P19447 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC7.95□□□□□ -1.14
ERCC3P19447 MAPK10-365ENST00000641902 3825 ntBASIC7.95□□□□□ -1.14
ERCC3P19447 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
ERCC3P19447 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
ERCC3P19447 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
ERCC3P19447 AP003175.1-201ENST00000641383 6658 ntBASIC7.95□□□□□ -1.14
ERCC3P19447 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.95□□□□□ -1.14
ERCC3P19447 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
ERCC3P19447 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
ERCC3P19447 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
ERCC3P19447 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
ERCC3P19447 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
ERCC3P19447 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.95□□□□□ -1.14
ERCC3P19447 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
ERCC3P19447 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.94□□□□□ -1.14
ERCC3P19447 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
ERCC3P19447 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
ERCC3P19447 DLEU2L-201ENST00000371086 3555 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
ERCC3P19447 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.94□□□□□ -1.14
ERCC3P19447 ZNF733P-202ENST00000444809 1573 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 OR4C1P-202ENST00000641065 1569 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC7.94□□□□□ -1.14
ERCC3P19447 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.94□□□□□ -1.14
ERCC3P19447 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
ERCC3P19447 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
ERCC3P19447 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
ERCC3P19447 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
ERCC3P19447 RNA5SP85-201ENST00000365378 119 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 RNU6-452P-201ENST00000384406 107 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
ERCC3P19447 HMGB3P31-201ENST00000413333 595 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC7.94□□□□□ -1.14
ERCC3P19447 AL139415.1-201ENST00000424862 352 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 AC002069.1-201ENST00000429649 1159 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.94□□□□□ -1.14
ERCC3P19447 OR13K1P-201ENST00000444577 975 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.94□□□□□ -1.14
ERCC3P19447 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.94□□□□□ -1.14
ERCC3P19447 RPS6P2-201ENST00000454208 705 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC7.94□□□□□ -1.14
ERCC3P19447 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC7.94□□□□□ -1.14
ERCC3P19447 PSMC1P13-201ENST00000458195 985 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 AC131392.1-201ENST00000506490 633 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 AC138866.2-201ENST00000508650 584 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 GUSBP9-201ENST00000510138 584 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.94□□□□□ -1.14
ERCC3P19447 MRPS36P3-201ENST00000519284 130 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 OR5AK3P-201ENST00000527486 1297 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 AC027369.2-201ENST00000528030 440 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC7.94□□□□□ -1.14
ERCC3P19447 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.94□□□□□ -1.14
ERCC3P19447 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC7.94□□□□□ -1.14
ERCC3P19447 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 AL109741.3-201ENST00000561748 592 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 AC023813.2-201ENST00000564321 469 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.94□□□□□ -1.14
ERCC3P19447 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.94□□□□□ -1.14
ERCC3P19447 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
ERCC3P19447 AC008088.1-201ENST00000580993 280 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.94□□□□□ -1.14
ERCC3P19447 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.94□□□□□ -1.14
ERCC3P19447 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.94□□□□□ -1.14
ERCC3P19447 AP002884.5-201ENST00000595053 1132 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 AC007349.4-201ENST00000608114 532 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 AC013468.1-201ENST00000608680 598 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.94□□□□□ -1.14
ERCC3P19447 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC7.94□□□□□ -1.14
ERCC3P19447 TSHZ2-205ENST00000626626 670 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
ERCC3P19447 AP003399.1-201ENST00000637534 361 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 CASC19-212ENST00000641153 1287 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 ZNF663P-202ENST00000641770 1131 ntBASIC7.94□□□□□ -1.14
ERCC3P19447 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
ERCC3P19447 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.94□□□□□ -1.14
ERCC3P19447 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
ERCC3P19447 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
ERCC3P19447 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
ERCC3P19447 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
ERCC3P19447 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
ERCC3P19447 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
ERCC3P19447 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
ERCC3P19447 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
ERCC3P19447 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.94□□□□□ -1.14
ERCC3P19447 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
ERCC3P19447 AL512329.1-201ENST00000404600 1592 ntBASIC7.93□□□□□ -1.14
ERCC3P19447 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.93□□□□□ -1.14
ERCC3P19447 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.93□□□□□ -1.14
ERCC3P19447 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
ERCC3P19447 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.93□□□□□ -1.14
ERCC3P19447 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
ERCC3P19447 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.93□□□□□ -1.14
ERCC3P19447 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
ERCC3P19447 AC104581.5-201ENST00000624171 7141 ntBASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms