Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.49□□□□□ -1.37
COL11A1P12107 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
COL11A1P12107 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL11A1P12107 AL121835.1-201ENST00000404250 354 ntBASIC6.49□□□□□ -1.37
COL11A1P12107 RNU4-34P-201ENST00000410431 124 ntBASIC6.49□□□□□ -1.37
COL11A1P12107 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.49□□□□□ -1.37
COL11A1P12107 AL163193.1-201ENST00000444895 788 ntBASIC6.49□□□□□ -1.37
COL11A1P12107 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.49□□□□□ -1.37
COL11A1P12107 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.49□□□□□ -1.37
COL11A1P12107 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.49□□□□□ -1.37
COL11A1P12107 AC005532.2-201ENST00000467154 373 ntBASIC6.49□□□□□ -1.37
COL11A1P12107 RN7SL860P-201ENST00000473738 223 ntBASIC6.49□□□□□ -1.37
COL11A1P12107 DUTP1-201ENST00000493631 470 ntBASIC6.49□□□□□ -1.37
COL11A1P12107 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.49□□□□□ -1.37
COL11A1P12107 IGLV3-24-201ENST00000517477 197 ntBASIC6.49□□□□□ -1.37
COL11A1P12107 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.49□□□□□ -1.37
COL11A1P12107 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.49□□□□□ -1.37
COL11A1P12107 AL034408.1-201ENST00000637712 664 ntBASIC6.49□□□□□ -1.37
COL11A1P12107 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.49□□□□□ -1.37
COL11A1P12107 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.49□□□□□ -1.37
COL11A1P12107 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL11A1P12107 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.49□□□□□ -1.37
COL11A1P12107 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL11A1P12107 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL11A1P12107 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL11A1P12107 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.49□□□□□ -1.37
COL11A1P12107 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL11A1P12107 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
COL11A1P12107 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL11A1P12107 AC009948.3-201ENST00000603415 1798 ntBASIC6.48□□□□□ -1.37
COL11A1P12107 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL11A1P12107 RNA5SP326-201ENST00000363209 110 ntBASIC6.48□□□□□ -1.37
COL11A1P12107 AC116036.1-201ENST00000412199 367 ntBASIC6.48□□□□□ -1.37
COL11A1P12107 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.48□□□□□ -1.37
COL11A1P12107 NPM1P22-201ENST00000427761 952 ntBASIC6.48□□□□□ -1.37
COL11A1P12107 AC023818.1-201ENST00000498379 384 ntBASIC6.48□□□□□ -1.37
COL11A1P12107 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.48□□□□□ -1.37
COL11A1P12107 AC132068.1-201ENST00000623805 459 ntBASIC6.48□□□□□ -1.37
COL11A1P12107 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.48□□□□□ -1.37
COL11A1P12107 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
COL11A1P12107 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
COL11A1P12107 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL11A1P12107 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL11A1P12107 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL11A1P12107 AC007342.5-201ENST00000571340 2142 ntBASIC6.48□□□□□ -1.37
COL11A1P12107 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL11A1P12107 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
COL11A1P12107 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC6.48□□□□□ -1.37
COL11A1P12107 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.48□□□□□ -1.37
COL11A1P12107 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC6.48□□□□□ -1.37
COL11A1P12107 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL11A1P12107 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL11A1P12107 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
COL11A1P12107 SPTLC1P2-201ENST00000407089 121 ntBASIC6.48□□□□□ -1.37
COL11A1P12107 MIR1286-201ENST00000408112 78 ntBASIC6.48□□□□□ -1.37
COL11A1P12107 RN7SKP273-201ENST00000411392 314 ntBASIC6.48□□□□□ -1.37
COL11A1P12107 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.48□□□□□ -1.37
COL11A1P12107 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.48□□□□□ -1.37
COL11A1P12107 LDHBP2-201ENST00000456969 1005 ntBASIC6.48□□□□□ -1.37
COL11A1P12107 CDC42P3-201ENST00000518493 633 ntBASIC6.48□□□□□ -1.37
COL11A1P12107 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.48□□□□□ -1.37
COL11A1P12107 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.48□□□□□ -1.37
COL11A1P12107 AF117829.2-201ENST00000619538 361 ntBASIC6.48□□□□□ -1.37
COL11A1P12107 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL11A1P12107 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL11A1P12107 AL008638.3-201ENST00000623027 5182 ntBASIC6.48□□□□□ -1.37
COL11A1P12107 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
COL11A1P12107 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.47□□□□□ -1.37
COL11A1P12107 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC6.47□□□□□ -1.37
COL11A1P12107 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.47□□□□□ -1.37
COL11A1P12107 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL11A1P12107 AP002991.2-201ENST00000623807 2801 ntBASIC6.47□□□□□ -1.37
COL11A1P12107 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
COL11A1P12107 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
COL11A1P12107 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL11A1P12107 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL11A1P12107 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
COL11A1P12107 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL11A1P12107 RNA5SP339-201ENST00000390987 122 ntBASIC6.47□□□□□ -1.37
COL11A1P12107 AC007161.1-204ENST00000423039 460 ntBASIC6.47□□□□□ -1.37
COL11A1P12107 AC108075.1-201ENST00000424692 529 ntBASIC6.47□□□□□ -1.37
COL11A1P12107 OR52B5P-201ENST00000435337 951 ntBASIC6.47□□□□□ -1.37
COL11A1P12107 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.47□□□□□ -1.37
COL11A1P12107 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.47□□□□□ -1.37
COL11A1P12107 AC110775.1-201ENST00000513721 462 ntBASIC6.47□□□□□ -1.37
COL11A1P12107 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.47□□□□□ -1.37
COL11A1P12107 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.47□□□□□ -1.37
COL11A1P12107 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.47□□□□□ -1.37
COL11A1P12107 AL121612.2-201ENST00000612261 482 ntBASIC6.47□□□□□ -1.37
COL11A1P12107 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.47□□□□□ -1.37
COL11A1P12107 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.47□□□□□ -1.37
COL11A1P12107 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.47□□□□□ -1.37
COL11A1P12107 OR52B5P-202ENST00000641118 1110 ntBASIC6.47□□□□□ -1.37
COL11A1P12107 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL11A1P12107 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL11A1P12107 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL11A1P12107 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL11A1P12107 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL11A1P12107 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.47□□□□□ -1.37
COL11A1P12107 CR383656.5-201ENST00000547616 1340 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms