Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC092070.2-203ENST00000598377 3644 ntBASIC9.87□□□□□ -0.83
TOP2AP11388 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
TOP2AP11388 RN7SKP115-201ENST00000363177 317 ntBASIC9.87□□□□□ -0.83
TOP2AP11388 AC008171.1-201ENST00000395058 200 ntBASIC9.87□□□□□ -0.83
TOP2AP11388 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC9.87□□□□□ -0.83
TOP2AP11388 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC9.87□□□□□ -0.83
TOP2AP11388 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
TOP2AP11388 AC147055.3-201ENST00000510547 851 ntBASIC9.87□□□□□ -0.83
TOP2AP11388 IGHVIII-13-1-201ENST00000517613 291 ntBASIC9.87□□□□□ -0.83
TOP2AP11388 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC9.87□□□□□ -0.83
TOP2AP11388 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
TOP2AP11388 RPL10P14-201ENST00000565265 298 ntBASIC9.87□□□□□ -0.83
TOP2AP11388 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC9.87□□□□□ -0.83
TOP2AP11388 AC133644.2-201ENST00000608142 540 ntBASIC9.87□□□□□ -0.83
TOP2AP11388 MVP-219ENST00000629059 120 ntTSL 5 BASIC9.87□□□□□ -0.83
TOP2AP11388 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
TOP2AP11388 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
TOP2AP11388 AC112255.1-201ENST00000624070 2493 ntBASIC9.86□□□□□ -0.83
TOP2AP11388 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
TOP2AP11388 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC9.86□□□□□ -0.83
TOP2AP11388 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
TOP2AP11388 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TOP2AP11388 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TOP2AP11388 MALAT1-202ENST00000534336 8708 ntBASIC9.86□□□□□ -0.83
TOP2AP11388 AC009831.5-201ENST00000624000 3189 ntBASIC9.86□□□□□ -0.83
TOP2AP11388 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
TOP2AP11388 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
TOP2AP11388 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TOP2AP11388 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
TOP2AP11388 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
TOP2AP11388 AP002991.2-201ENST00000623807 2801 ntBASIC9.86□□□□□ -0.83
TOP2AP11388 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TOP2AP11388 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
TOP2AP11388 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TOP2AP11388 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
TOP2AP11388 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
TOP2AP11388 RNA5SP91-201ENST00000390902 119 ntBASIC9.86□□□□□ -0.83
TOP2AP11388 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC9.86□□□□□ -0.83
TOP2AP11388 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC9.86□□□□□ -0.83
TOP2AP11388 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC9.86□□□□□ -0.83
TOP2AP11388 HCG14-201ENST00000444986 413 ntTSL 2 BASIC9.86□□□□□ -0.83
TOP2AP11388 AL445687.2-201ENST00000458156 728 ntBASIC9.86□□□□□ -0.83
TOP2AP11388 RN7SL591P-201ENST00000496150 292 ntBASIC9.86□□□□□ -0.83
TOP2AP11388 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC9.86□□□□□ -0.83
TOP2AP11388 CSNK1A1P3-201ENST00000504105 330 ntBASIC9.86□□□□□ -0.83
TOP2AP11388 AC096754.1-201ENST00000508904 818 ntBASIC9.86□□□□□ -0.83
TOP2AP11388 RN7SKP98-201ENST00000517070 156 ntBASIC9.86□□□□□ -0.83
TOP2AP11388 IGHVIII-76-1-201ENST00000523776 286 ntBASIC9.86□□□□□ -0.83
TOP2AP11388 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC9.86□□□□□ -0.83
TOP2AP11388 AC069307.1-201ENST00000602820 447 ntBASIC9.86□□□□□ -0.83
TOP2AP11388 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TOP2AP11388 DPY19L1P1-201ENST00000417811 2594 ntBASIC9.86□□□□□ -0.83
TOP2AP11388 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TOP2AP11388 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
TOP2AP11388 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
TOP2AP11388 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC9.85□□□□□ -0.83
TOP2AP11388 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
TOP2AP11388 AC022034.1-201ENST00000512867 2156 ntBASIC9.85□□□□□ -0.83
TOP2AP11388 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TOP2AP11388 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
TOP2AP11388 AL645733.1-201ENST00000402250 217 ntBASIC9.85□□□□□ -0.83
TOP2AP11388 RPA2P2-201ENST00000419698 796 ntBASIC9.85□□□□□ -0.83
TOP2AP11388 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC9.85□□□□□ -0.83
TOP2AP11388 AC105399.1-202ENST00000447303 205 ntBASIC9.85□□□□□ -0.83
TOP2AP11388 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC9.85□□□□□ -0.83
TOP2AP11388 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC9.85□□□□□ -0.83
TOP2AP11388 AC073342.3-201ENST00000624211 193 ntBASIC9.85□□□□□ -0.83
TOP2AP11388 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
TOP2AP11388 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC9.85□□□□□ -0.83
TOP2AP11388 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC9.85□□□□□ -0.83
TOP2AP11388 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
TOP2AP11388 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC9.85□□□□□ -0.83
TOP2AP11388 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
TOP2AP11388 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC9.84□□□□□ -0.83
TOP2AP11388 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TOP2AP11388 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TOP2AP11388 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
TOP2AP11388 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TOP2AP11388 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
TOP2AP11388 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
TOP2AP11388 RN7SKP104-201ENST00000362605 328 ntBASIC9.84□□□□□ -0.83
TOP2AP11388 RNA5-8SP5-201ENST00000365304 152 ntBASIC9.84□□□□□ -0.83
TOP2AP11388 U3.36-201ENST00000408418 213 ntBASIC9.84□□□□□ -0.83
TOP2AP11388 AC007161.1-204ENST00000423039 460 ntBASIC9.84□□□□□ -0.83
TOP2AP11388 AC073410.1-201ENST00000435125 589 ntBASIC9.84□□□□□ -0.83
TOP2AP11388 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC9.84□□□□□ -0.83
TOP2AP11388 AC105420.1-201ENST00000504389 582 ntBASIC9.84□□□□□ -0.83
TOP2AP11388 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC9.84□□□□□ -0.83
TOP2AP11388 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC9.84□□□□□ -0.83
TOP2AP11388 AC007346.2-201ENST00000564816 892 ntBASIC9.84□□□□□ -0.83
TOP2AP11388 AL445528.2-201ENST00000620582 470 ntBASIC9.84□□□□□ -0.83
TOP2AP11388 AP001885.1-201ENST00000621658 558 ntBASIC9.84□□□□□ -0.83
TOP2AP11388 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
TOP2AP11388 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC9.84□□□□□ -0.83
TOP2AP11388 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
TOP2AP11388 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
TOP2AP11388 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
TOP2AP11388 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
TOP2AP11388 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
TOP2AP11388 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms