Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 OR7E158P-201ENST00000524483 910 ntBASIC6.43□□□□□ -1.38
TPM1P09493 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.43□□□□□ -1.38
TPM1P09493 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.43□□□□□ -1.38
TPM1P09493 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.43□□□□□ -1.38
TPM1P09493 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.43□□□□□ -1.38
TPM1P09493 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.43□□□□□ -1.38
TPM1P09493 NDUFB9P1-201ENST00000604683 510 ntBASIC6.43□□□□□ -1.38
TPM1P09493 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.43□□□□□ -1.38
TPM1P09493 NANOGP3-201ENST00000605855 286 ntBASIC6.43□□□□□ -1.38
TPM1P09493 AC138965.3-201ENST00000623875 498 ntBASIC6.43□□□□□ -1.38
TPM1P09493 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TPM1P09493 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TPM1P09493 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.43□□□□□ -1.38
TPM1P09493 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.43□□□□□ -1.38
TPM1P09493 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.43□□□□□ -1.38
TPM1P09493 AL022322.2-201ENST00000624072 20397 ntBASIC6.43□□□□□ -1.38
TPM1P09493 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TPM1P09493 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
TPM1P09493 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.43□□□□□ -1.38
TPM1P09493 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TPM1P09493 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
TPM1P09493 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TPM1P09493 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.42□□□□□ -1.38
TPM1P09493 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.42□□□□□ -1.38
TPM1P09493 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
TPM1P09493 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.42□□□□□ -1.38
TPM1P09493 OR9K1P-202ENST00000641111 3217 ntBASIC6.42□□□□□ -1.38
TPM1P09493 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TPM1P09493 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
TPM1P09493 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TPM1P09493 AL358178.1-201ENST00000407698 397 ntBASIC6.42□□□□□ -1.38
TPM1P09493 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.42□□□□□ -1.38
TPM1P09493 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.42□□□□□ -1.38
TPM1P09493 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
TPM1P09493 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.42□□□□□ -1.38
TPM1P09493 TRIM60P16-201ENST00000444048 694 ntBASIC6.42□□□□□ -1.38
TPM1P09493 WDR82P2-201ENST00000444540 928 ntBASIC6.42□□□□□ -1.38
TPM1P09493 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.42□□□□□ -1.38
TPM1P09493 AC002553.3-201ENST00000453002 341 ntBASIC6.42□□□□□ -1.38
TPM1P09493 CBX1P2-201ENST00000453841 458 ntBASIC6.42□□□□□ -1.38
TPM1P09493 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
TPM1P09493 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.42□□□□□ -1.38
TPM1P09493 AC131935.1-201ENST00000524621 333 ntBASIC6.42□□□□□ -1.38
TPM1P09493 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.42□□□□□ -1.38
TPM1P09493 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.42□□□□□ -1.38
TPM1P09493 RN7SL657P-201ENST00000582431 293 ntBASIC6.42□□□□□ -1.38
TPM1P09493 AC024267.2-201ENST00000582737 417 ntBASIC6.42□□□□□ -1.38
TPM1P09493 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TPM1P09493 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.42□□□□□ -1.38
TPM1P09493 AC139792.1-201ENST00000607051 647 ntBASIC6.42□□□□□ -1.38
TPM1P09493 AC012511.1-201ENST00000608140 449 ntBASIC6.42□□□□□ -1.38
TPM1P09493 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.42□□□□□ -1.38
TPM1P09493 AL122023.1-201ENST00000622847 530 ntBASIC6.42□□□□□ -1.38
TPM1P09493 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.42□□□□□ -1.38
TPM1P09493 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
TPM1P09493 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
TPM1P09493 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.42□□□□□ -1.38
TPM1P09493 AC119674.1-202ENST00000641333 1860 ntBASIC6.42□□□□□ -1.38
TPM1P09493 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TPM1P09493 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.42□□□□□ -1.38
TPM1P09493 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
TPM1P09493 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TPM1P09493 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TPM1P09493 NR1H5P-201ENST00000452683 1377 ntBASIC6.42□□□□□ -1.38
TPM1P09493 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TPM1P09493 AC097063.1-201ENST00000426714 1797 ntBASIC6.41□□□□□ -1.38
TPM1P09493 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.41□□□□□ -1.38
TPM1P09493 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.41□□□□□ -1.38
TPM1P09493 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
TPM1P09493 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
TPM1P09493 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TPM1P09493 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TPM1P09493 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TPM1P09493 RNA5SP77-201ENST00000365394 120 ntBASIC6.41□□□□□ -1.38
TPM1P09493 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC6.41□□□□□ -1.38
TPM1P09493 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TPM1P09493 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.41□□□□□ -1.38
TPM1P09493 GAPDHP19-201ENST00000431768 1005 ntBASIC6.41□□□□□ -1.38
TPM1P09493 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.41□□□□□ -1.38
TPM1P09493 AL031681.1-201ENST00000443304 400 ntBASIC6.41□□□□□ -1.38
TPM1P09493 ASNSP4-201ENST00000511103 447 ntBASIC6.41□□□□□ -1.38
TPM1P09493 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.41□□□□□ -1.38
TPM1P09493 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.41□□□□□ -1.38
TPM1P09493 RNA5SP230-201ENST00000517039 122 ntBASIC6.41□□□□□ -1.38
TPM1P09493 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.41□□□□□ -1.38
TPM1P09493 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TPM1P09493 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.41□□□□□ -1.38
TPM1P09493 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TPM1P09493 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.41□□□□□ -1.38
TPM1P09493 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.41□□□□□ -1.38
TPM1P09493 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.41□□□□□ -1.38
TPM1P09493 AC009852.2-201ENST00000567898 485 ntBASIC6.41□□□□□ -1.38
TPM1P09493 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.41□□□□□ -1.38
TPM1P09493 MIR4660-201ENST00000583549 74 ntBASIC6.41□□□□□ -1.38
TPM1P09493 AC006363.1-201ENST00000603806 463 ntBASIC6.41□□□□□ -1.38
TPM1P09493 AL591222.2-201ENST00000604443 754 ntBASIC6.41□□□□□ -1.38
TPM1P09493 RFPL4AP6-201ENST00000616792 846 ntBASIC6.41□□□□□ -1.38
TPM1P09493 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.41□□□□□ -1.38
TPM1P09493 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
TPM1P09493 MRRFP1-201ENST00000435941 1675 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms