Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC064862.4-201ENST00000442180 334 ntBASIC5.79□□□□□ -1.48
HOXC4P09017 LRRC37A14P-201ENST00000452297 462 ntBASIC5.79□□□□□ -1.48
HOXC4P09017 RN7SL101P-201ENST00000496350 279 ntBASIC5.79□□□□□ -1.48
HOXC4P09017 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC4P09017 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC4P09017 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC4P09017 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC4P09017 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC4P09017 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC4P09017 TXNP4-201ENST00000575018 310 ntBASIC5.79□□□□□ -1.48
HOXC4P09017 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC4P09017 RN7SL753P-201ENST00000581238 290 ntBASIC5.79□□□□□ -1.48
HOXC4P09017 MIR132-201ENST00000591554 101 ntBASIC5.79□□□□□ -1.48
HOXC4P09017 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC4P09017 RNA5SP440-201ENST00000612665 119 ntBASIC5.79□□□□□ -1.48
HOXC4P09017 MIR6862-1-201ENST00000613016 70 ntBASIC5.79□□□□□ -1.48
HOXC4P09017 MIR6862-2-201ENST00000614755 70 ntBASIC5.79□□□□□ -1.48
HOXC4P09017 RN7SL544P-201ENST00000617232 284 ntBASIC5.79□□□□□ -1.48
HOXC4P09017 RN7SL763P-201ENST00000620922 284 ntBASIC5.79□□□□□ -1.48
HOXC4P09017 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.79□□□□□ -1.48
HOXC4P09017 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HOXC4P09017 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HOXC4P09017 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HOXC4P09017 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC4P09017 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
HOXC4P09017 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC4P09017 RPS2P45-201ENST00000469997 2057 ntBASIC5.79□□□□□ -1.48
HOXC4P09017 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC4P09017 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HOXC4P09017 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HOXC4P09017 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXC4P09017 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC4P09017 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HOXC4P09017 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.79□□□□□ -1.48
HOXC4P09017 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HOXC4P09017 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC4P09017 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC4P09017 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC4P09017 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC4P09017 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC4P09017 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HOXC4P09017 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC4P09017 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC4P09017 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC4P09017 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HOXC4P09017 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC4P09017 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC4P09017 MRPL53P1-201ENST00000414323 319 ntBASIC5.78□□□□□ -1.48
HOXC4P09017 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC4P09017 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC4P09017 AC019205.1-201ENST00000421830 730 ntBASIC5.78□□□□□ -1.48
HOXC4P09017 OR5W1P-201ENST00000423705 938 ntBASIC5.78□□□□□ -1.48
HOXC4P09017 CHEK2P5-201ENST00000423877 246 ntBASIC5.78□□□□□ -1.48
HOXC4P09017 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC4P09017 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXC4P09017 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC4P09017 RPL34P27-201ENST00000428810 349 ntBASIC5.78□□□□□ -1.48
HOXC4P09017 BX119321.1-201ENST00000428912 797 ntBASIC5.78□□□□□ -1.48
HOXC4P09017 AL391987.1-201ENST00000441025 200 ntBASIC5.78□□□□□ -1.48
HOXC4P09017 AL355032.1-201ENST00000472981 438 ntBASIC5.78□□□□□ -1.48
HOXC4P09017 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.78□□□□□ -1.48
HOXC4P09017 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC4P09017 AP000619.2-201ENST00000546014 969 ntBASIC5.78□□□□□ -1.48
HOXC4P09017 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC4P09017 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.78□□□□□ -1.48
HOXC4P09017 GARSP1-201ENST00000570895 719 ntBASIC5.78□□□□□ -1.48
HOXC4P09017 AC010547.6-201ENST00000571789 193 ntBASIC5.78□□□□□ -1.48
HOXC4P09017 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.78□□□□□ -1.48
HOXC4P09017 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC4P09017 AC022919.1-201ENST00000624979 626 ntBASIC5.78□□□□□ -1.48
HOXC4P09017 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC4P09017 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
HOXC4P09017 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC4P09017 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC4P09017 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HOXC4P09017 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC4P09017 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.48
HOXC4P09017 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HOXC4P09017 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC4P09017 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC4P09017 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC4P09017 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC4P09017 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
HOXC4P09017 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC4P09017 AC023141.8-201ENST00000442554 208 ntBASIC5.77□□□□□ -1.49
HOXC4P09017 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXC4P09017 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC4P09017 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXC4P09017 IGKV2-19-201ENST00000518132 283 ntBASIC5.77□□□□□ -1.49
HOXC4P09017 AC244502.2-201ENST00000543361 851 ntBASIC5.77□□□□□ -1.49
HOXC4P09017 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC4P09017 IGBP1P1-201ENST00000554337 1009 ntBASIC5.77□□□□□ -1.49
HOXC4P09017 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXC4P09017 AC007346.2-201ENST00000564816 892 ntBASIC5.77□□□□□ -1.49
HOXC4P09017 AC020978.7-201ENST00000575953 1187 ntBASIC5.77□□□□□ -1.49
HOXC4P09017 AC006115.2-201ENST00000596823 202 ntBASIC5.77□□□□□ -1.49
HOXC4P09017 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXC4P09017 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXC4P09017 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
HOXC4P09017 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms