Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.04□□□□□ -1.44
MMP2P08253 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.04□□□□□ -1.44
MMP2P08253 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.04□□□□□ -1.44
MMP2P08253 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.04□□□□□ -1.44
MMP2P08253 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.04□□□□□ -1.44
MMP2P08253 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.04□□□□□ -1.44
MMP2P08253 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.04□□□□□ -1.44
MMP2P08253 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MMP2P08253 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.04□□□□□ -1.44
MMP2P08253 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.04□□□□□ -1.44
MMP2P08253 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
MMP2P08253 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.04□□□□□ -1.44
MMP2P08253 AC002310.3-201ENST00000569728 723 ntBASIC6.04□□□□□ -1.44
MMP2P08253 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.04□□□□□ -1.44
MMP2P08253 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.04□□□□□ -1.44
MMP2P08253 AL136370.1-201ENST00000608166 691 ntBASIC6.04□□□□□ -1.44
MMP2P08253 AC108673.3-201ENST00000609183 335 ntBASIC6.04□□□□□ -1.44
MMP2P08253 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
MMP2P08253 AC006213.4-201ENST00000616184 634 ntBASIC6.04□□□□□ -1.44
MMP2P08253 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
MMP2P08253 AC069234.4-201ENST00000621276 412 ntBASIC6.04□□□□□ -1.44
MMP2P08253 AC073593.1-201ENST00000624500 411 ntBASIC6.04□□□□□ -1.44
MMP2P08253 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.04□□□□□ -1.44
MMP2P08253 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.04□□□□□ -1.44
MMP2P08253 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
MMP2P08253 IFIT1P1-201ENST00000400497 1449 ntBASIC6.04□□□□□ -1.44
MMP2P08253 AC130304.1-201ENST00000622942 2385 ntBASIC6.04□□□□□ -1.44
MMP2P08253 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
MMP2P08253 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.04□□□□□ -1.44
MMP2P08253 AC079753.1-201ENST00000623243 3868 ntBASIC6.04□□□□□ -1.44
MMP2P08253 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
MMP2P08253 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MMP2P08253 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.04□□□□□ -1.44
MMP2P08253 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.04□□□□□ -1.44
MMP2P08253 AP003486.1-201ENST00000525716 3994 ntBASIC6.04□□□□□ -1.44
MMP2P08253 LYARP1-201ENST00000436977 1501 ntBASIC6.04□□□□□ -1.44
MMP2P08253 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.04□□□□□ -1.44
MMP2P08253 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MMP2P08253 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
MMP2P08253 AC034229.2-201ENST00000566945 2508 ntBASIC6.03□□□□□ -1.44
MMP2P08253 THAP12P9-201ENST00000503971 2360 ntBASIC6.03□□□□□ -1.44
MMP2P08253 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.03□□□□□ -1.44
MMP2P08253 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
MMP2P08253 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
MMP2P08253 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
MMP2P08253 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
MMP2P08253 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.03□□□□□ -1.44
MMP2P08253 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.03□□□□□ -1.44
MMP2P08253 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
MMP2P08253 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.03□□□□□ -1.44
MMP2P08253 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
MMP2P08253 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
MMP2P08253 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
MMP2P08253 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
MMP2P08253 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
MMP2P08253 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.03□□□□□ -1.44
MMP2P08253 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
MMP2P08253 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
MMP2P08253 Y_RNA.62-201ENST00000362840 99 ntBASIC6.03□□□□□ -1.44
MMP2P08253 RNU6-819P-201ENST00000364116 107 ntBASIC6.03□□□□□ -1.44
MMP2P08253 MT-RNR1-201ENST00000389680 954 ntBASIC6.03□□□□□ -1.44
MMP2P08253 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.03□□□□□ -1.44
MMP2P08253 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
MMP2P08253 AL096800.1-201ENST00000405326 893 ntBASIC6.03□□□□□ -1.44
MMP2P08253 RNU4-64P-201ENST00000410795 131 ntBASIC6.03□□□□□ -1.44
MMP2P08253 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.03□□□□□ -1.44
MMP2P08253 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.03□□□□□ -1.44
MMP2P08253 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.03□□□□□ -1.44
MMP2P08253 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.03□□□□□ -1.44
MMP2P08253 AL445928.1-201ENST00000435545 222 ntBASIC6.03□□□□□ -1.44
MMP2P08253 ATP5LP2-201ENST00000440646 311 ntBASIC6.03□□□□□ -1.44
MMP2P08253 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.03□□□□□ -1.44
MMP2P08253 THAP12P8-201ENST00000447914 2115 ntBASIC6.03□□□□□ -1.44
MMP2P08253 OR52Y1P-201ENST00000452418 828 ntBASIC6.03□□□□□ -1.44
MMP2P08253 GEMIN2P1-201ENST00000454246 752 ntBASIC6.03□□□□□ -1.44
MMP2P08253 AC098847.1-201ENST00000473094 348 ntBASIC6.03□□□□□ -1.44
MMP2P08253 AP002884.1-201ENST00000479691 655 ntBASIC6.03□□□□□ -1.44
MMP2P08253 AC093827.1-201ENST00000480094 861 ntBASIC6.03□□□□□ -1.44
MMP2P08253 AC008629.2-201ENST00000503783 483 ntBASIC6.03□□□□□ -1.44
MMP2P08253 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.03□□□□□ -1.44
MMP2P08253 TOMM22P4-201ENST00000511318 336 ntBASIC6.03□□□□□ -1.44
MMP2P08253 RN7SKP288-201ENST00000516227 268 ntBASIC6.03□□□□□ -1.44
MMP2P08253 RNU6-943P-201ENST00000516960 98 ntBASIC6.03□□□□□ -1.44
MMP2P08253 KCTD9P6-201ENST00000522306 950 ntBASIC6.03□□□□□ -1.44
MMP2P08253 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.03□□□□□ -1.44
MMP2P08253 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.03□□□□□ -1.44
MMP2P08253 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.03□□□□□ -1.44
MMP2P08253 LINC00556-201ENST00000569603 412 ntBASIC6.03□□□□□ -1.44
MMP2P08253 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
MMP2P08253 PRELID3BP3-201ENST00000584963 545 ntBASIC6.03□□□□□ -1.44
MMP2P08253 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC6.03□□□□□ -1.44
MMP2P08253 AC012254.3-201ENST00000591183 2117 ntBASIC6.03□□□□□ -1.44
MMP2P08253 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.03□□□□□ -1.44
MMP2P08253 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.03□□□□□ -1.44
MMP2P08253 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.03□□□□□ -1.44
MMP2P08253 AL109620.1-201ENST00000618738 1197 ntBASIC6.03□□□□□ -1.44
MMP2P08253 AP000720.1-201ENST00000625091 483 ntBASIC6.03□□□□□ -1.44
MMP2P08253 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.03□□□□□ -1.44
MMP2P08253 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
MMP2P08253 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms