Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.45□□□□□ -1.38
RB1P06400 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.45□□□□□ -1.38
RB1P06400 AL121579.2-201ENST00000555466 590 ntBASIC6.45□□□□□ -1.38
RB1P06400 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.45□□□□□ -1.38
RB1P06400 MIR4301-201ENST00000577203 66 ntBASIC6.45□□□□□ -1.38
RB1P06400 AC233702.7-202ENST00000582941 211 ntBASIC6.45□□□□□ -1.38
RB1P06400 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.45□□□□□ -1.38
RB1P06400 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.45□□□□□ -1.38
RB1P06400 AC079395.2-201ENST00000610982 737 ntBASIC6.45□□□□□ -1.38
RB1P06400 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.45□□□□□ -1.38
RB1P06400 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.45□□□□□ -1.38
RB1P06400 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
RB1P06400 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RB1P06400 CCNT2P1-201ENST00000423082 1315 ntBASIC6.45□□□□□ -1.38
RB1P06400 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RB1P06400 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RB1P06400 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RB1P06400 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RB1P06400 AC110597.1-201ENST00000562669 3176 ntBASIC6.45□□□□□ -1.38
RB1P06400 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.45□□□□□ -1.38
RB1P06400 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RB1P06400 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RB1P06400 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
RB1P06400 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RB1P06400 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RB1P06400 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
RB1P06400 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RB1P06400 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
RB1P06400 SELENOWP1-201ENST00000322792 252 ntBASIC6.44□□□□□ -1.38
RB1P06400 GAPDHP24-201ENST00000328713 983 ntBASIC6.44□□□□□ -1.38
RB1P06400 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.44□□□□□ -1.38
RB1P06400 NPM1P4-201ENST00000414095 812 ntBASIC6.44□□□□□ -1.38
RB1P06400 HMGB1P32-201ENST00000425971 565 ntBASIC6.44□□□□□ -1.38
RB1P06400 AC126120.1-201ENST00000431082 470 ntBASIC6.44□□□□□ -1.38
RB1P06400 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.44□□□□□ -1.38
RB1P06400 SIAH1P1-201ENST00000479411 923 ntBASIC6.44□□□□□ -1.38
RB1P06400 AC138866.2-201ENST00000508650 584 ntBASIC6.44□□□□□ -1.38
RB1P06400 AC147055.1-201ENST00000509261 750 ntBASIC6.44□□□□□ -1.38
RB1P06400 BX510359.5-201ENST00000515651 304 ntBASIC6.44□□□□□ -1.38
RB1P06400 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.44□□□□□ -1.38
RB1P06400 HNRNPRP2-201ENST00000528421 743 ntBASIC6.44□□□□□ -1.38
RB1P06400 AC130364.2-201ENST00000528639 604 ntBASIC6.44□□□□□ -1.38
RB1P06400 HMGN2P36-201ENST00000529541 409 ntBASIC6.44□□□□□ -1.38
RB1P06400 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.44□□□□□ -1.38
RB1P06400 IGBP1P1-201ENST00000554337 1009 ntBASIC6.44□□□□□ -1.38
RB1P06400 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.44□□□□□ -1.38
RB1P06400 AP000919.1-201ENST00000582850 985 ntBASIC6.44□□□□□ -1.38
RB1P06400 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.44□□□□□ -1.38
RB1P06400 AC096586.2-201ENST00000610260 441 ntBASIC6.44□□□□□ -1.38
RB1P06400 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.44□□□□□ -1.38
RB1P06400 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
RB1P06400 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.44□□□□□ -1.38
RB1P06400 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.44□□□□□ -1.38
RB1P06400 AC119674.1-202ENST00000641333 1860 ntBASIC6.44□□□□□ -1.38
RB1P06400 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
RB1P06400 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
RB1P06400 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.44□□□□□ -1.38
RB1P06400 AL359091.1-201ENST00000449048 1734 ntBASIC6.44□□□□□ -1.38
RB1P06400 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
RB1P06400 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.44□□□□□ -1.38
RB1P06400 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RB1P06400 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RB1P06400 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.44□□□□□ -1.38
RB1P06400 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.44□□□□□ -1.38
RB1P06400 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RB1P06400 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
RB1P06400 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
RB1P06400 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RB1P06400 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
RB1P06400 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RB1P06400 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RB1P06400 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
RB1P06400 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RB1P06400 PARP4P1-201ENST00000435945 2337 ntBASIC6.43□□□□□ -1.38
RB1P06400 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RB1P06400 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.43□□□□□ -1.38
RB1P06400 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
RB1P06400 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.43□□□□□ -1.38
RB1P06400 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
RB1P06400 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RB1P06400 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
RB1P06400 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RB1P06400 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RB1P06400 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.43□□□□□ -1.38
RB1P06400 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
RB1P06400 RNU1-19P-201ENST00000363306 165 ntBASIC6.43□□□□□ -1.38
RB1P06400 RNA5SP333-201ENST00000363466 118 ntBASIC6.43□□□□□ -1.38
RB1P06400 RNA5SP500-201ENST00000364486 119 ntBASIC6.43□□□□□ -1.38
RB1P06400 RNA5SP334-201ENST00000364825 118 ntBASIC6.43□□□□□ -1.38
RB1P06400 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RB1P06400 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
RB1P06400 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RB1P06400 RNU4-34P-201ENST00000410431 124 ntBASIC6.43□□□□□ -1.38
RB1P06400 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.43□□□□□ -1.38
RB1P06400 AC117434.1-201ENST00000419971 836 ntBASIC6.43□□□□□ -1.38
RB1P06400 NME1P1-201ENST00000420914 382 ntBASIC6.43□□□□□ -1.38
RB1P06400 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.43□□□□□ -1.38
RB1P06400 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.43□□□□□ -1.38
RB1P06400 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.43□□□□□ -1.38
RB1P06400 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms