Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HLA-DQB2P05538 FUNDC2P3-201ENST00000334716 533 ntBASIC5.86□□□□□ -1.47
HLA-DQB2P05538 MIR130A-201ENST00000385274 89 ntBASIC5.86□□□□□ -1.47
HLA-DQB2P05538 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.86□□□□□ -1.47
HLA-DQB2P05538 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.86□□□□□ -1.47
HLA-DQB2P05538 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.86□□□□□ -1.47
HLA-DQB2P05538 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.86□□□□□ -1.47
HLA-DQB2P05538 NDUFA5P5-201ENST00000468361 342 ntBASIC5.86□□□□□ -1.47
HLA-DQB2P05538 AC093719.1-201ENST00000480427 441 ntBASIC5.86□□□□□ -1.47
HLA-DQB2P05538 NANOGNBP2-201ENST00000544753 553 ntBASIC5.86□□□□□ -1.47
HLA-DQB2P05538 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.86□□□□□ -1.47
HLA-DQB2P05538 AC005726.4-201ENST00000582858 458 ntBASIC5.86□□□□□ -1.47
HLA-DQB2P05538 AC060780.2-201ENST00000589047 198 ntBASIC5.86□□□□□ -1.47
HLA-DQB2P05538 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DQB2P05538 OR8G3P-202ENST00000641572 1255 ntBASIC5.86□□□□□ -1.47
HLA-DQB2P05538 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DQB2P05538 AC020656.2-201ENST00000613291 5309 ntBASIC5.86□□□□□ -1.47
HLA-DQB2P05538 AC007159.1-201ENST00000566529 4706 ntBASIC5.86□□□□□ -1.47
HLA-DQB2P05538 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HLA-DQB2P05538 ABCA11P-202ENST00000504019 2110 ntBASIC5.86□□□□□ -1.47
HLA-DQB2P05538 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.85□□□□□ -1.47
HLA-DQB2P05538 AK4P4-201ENST00000419465 646 ntBASIC5.85□□□□□ -1.47
HLA-DQB2P05538 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 RPL5P10-201ENST00000445207 894 ntBASIC5.85□□□□□ -1.47
HLA-DQB2P05538 RPL32P33-201ENST00000487023 394 ntBASIC5.85□□□□□ -1.47
HLA-DQB2P05538 DUTP1-201ENST00000493631 470 ntBASIC5.85□□□□□ -1.47
HLA-DQB2P05538 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 ZNF322P1-201ENST00000568013 1209 ntBASIC5.85□□□□□ -1.47
HLA-DQB2P05538 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 HIRAP1-201ENST00000605318 787 ntBASIC5.85□□□□□ -1.47
HLA-DQB2P05538 AL096712.1-201ENST00000614561 159 ntBASIC5.85□□□□□ -1.47
HLA-DQB2P05538 AP005431.1-201ENST00000618479 319 ntBASIC5.85□□□□□ -1.47
HLA-DQB2P05538 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.85□□□□□ -1.47
HLA-DQB2P05538 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 WDR95P-201ENST00000425638 1542 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 NEPNP-201ENST00000404786 1371 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 AL159987.1-201ENST00000347911 293 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 MIR621-201ENST00000384919 96 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 RN7SKP279-201ENST00000411383 298 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 AC245060.4-201ENST00000413293 1121 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 NIFKP3-201ENST00000417799 865 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 OR5W1P-201ENST00000423705 938 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 AC242426.1-201ENST00000435270 960 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 AP006222.1-205ENST00000450734 457 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 OR52E7P-201ENST00000452394 933 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 AC011476.1-201ENST00000466725 307 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 RPSAP37-201ENST00000470913 821 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 RPS17P15-201ENST00000475609 349 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 PDCL3P4-201ENST00000489621 720 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 AC009120.1-201ENST00000493458 473 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 RNA5SP271-201ENST00000516700 88 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 SCARNA6.1-201ENST00000516989 238 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 MIR4260-201ENST00000583107 67 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 AC015802.2-201ENST00000589690 189 ntBASIC5.84□□□□□ -1.47
HLA-DQB2P05538 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.84□□□□□ -1.47
HLA-DQB2P05538 AL365181.4-201ENST00000609800 547 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms