Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 FRG1EP-201ENST00000634469 770 ntBASIC4.41□□□□□ -1.7
HLA-DQA1P01909 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DQA1P01909 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
HLA-DQA1P01909 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.4□□□□□ -1.7
HLA-DQA1P01909 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HLA-DQA1P01909 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.4□□□□□ -1.7
HLA-DQA1P01909 AC011933.2-201ENST00000578539 2790 ntBASIC4.4□□□□□ -1.7
HLA-DQA1P01909 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.4□□□□□ -1.7
HLA-DQA1P01909 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 SNORD35A-201ENST00000363389 86 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 RNU1-136P-201ENST00000384181 164 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 MIR1266-201ENST00000408125 84 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 GNG5P5-201ENST00000420444 220 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 GAPDHP75-201ENST00000433910 943 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 AL845321.1-201ENST00000444603 348 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 AC099670.1-201ENST00000455141 783 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 SNORD125-201ENST00000459538 96 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 RPL5P33-201ENST00000487833 905 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 RNA5SP96-201ENST00000516041 107 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 GTF2IP11-201ENST00000526931 420 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 LSM3P2-201ENST00000551246 273 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 HMGN1P26-201ENST00000558737 303 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 AC127024.5-201ENST00000580085 462 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 AC004805.3-201ENST00000603178 310 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 AL390877.1-201ENST00000605704 214 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 AC139792.1-201ENST00000607051 647 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 AC010632.3-201ENST00000611377 369 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 MIR6070-201ENST00000613967 103 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 AC009950.2-201ENST00000636548 183 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 AC132825.8-201ENST00000640783 297 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 SAMMSON-227ENST00000642114 1199 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 MRRFP1-201ENST00000435941 1675 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
HLA-DQA1P01909 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.4□□□□□ -1.71
HLA-DQA1P01909 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 PPIAP24-201ENST00000328558 471 ntBASIC4.39□□□□□ -1.71
HLA-DQA1P01909 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 RN7SKP74-201ENST00000362849 309 ntBASIC4.39□□□□□ -1.71
HLA-DQA1P01909 TPT1-204ENST00000379060 764 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 ZNF37CP-201ENST00000406795 241 ntBASIC4.39□□□□□ -1.71
HLA-DQA1P01909 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DQA1P01909 AL589794.1-201ENST00000424971 390 ntBASIC4.39□□□□□ -1.71
HLA-DQA1P01909 AP003385.1-201ENST00000426387 893 ntBASIC4.39□□□□□ -1.71
HLA-DQA1P01909 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms