Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NKX2-2O95096 AL355377.1-201ENST00000621125 1653 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.63□□□□□ -1.51
NKX2-2O95096 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
NKX2-2O95096 AC009135.2-201ENST00000624136 1768 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX2-2O95096 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.63□□□□□ -1.51
NKX2-2O95096 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.63□□□□□ -1.51
NKX2-2O95096 RNU6-1251P-201ENST00000364502 107 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.63□□□□□ -1.51
NKX2-2O95096 RBBP4P5-201ENST00000398583 1266 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 SNORA77.2-201ENST00000408571 112 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 RN7SKP86-201ENST00000410454 332 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 AC073464.3-201ENST00000422564 712 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 AC096632.2-201ENST00000438139 1239 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 SNRPFP2-201ENST00000440710 251 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.63□□□□□ -1.51
NKX2-2O95096 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.63□□□□□ -1.51
NKX2-2O95096 ZNF619P1-201ENST00000446539 752 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 AL162739.1-201ENST00000450606 307 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 AP002345.1-201ENST00000456493 928 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 RN7SL254P-201ENST00000460609 284 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 AC090543.1-201ENST00000492168 485 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.63□□□□□ -1.51
NKX2-2O95096 OR7E99P-201ENST00000505750 922 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 AC112484.3-201ENST00000505910 329 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 AC008628.1-201ENST00000508663 265 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 FABP5P6-201ENST00000510588 409 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 MAST4-IT1-201ENST00000514241 658 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 RNU6-889P-201ENST00000517189 103 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.63□□□□□ -1.51
NKX2-2O95096 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.63□□□□□ -1.51
NKX2-2O95096 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX2-2O95096 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.63□□□□□ -1.51
NKX2-2O95096 MRPS21P8-201ENST00000569196 235 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 AC090079.2-201ENST00000575289 768 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 OR1E3-201ENST00000575608 948 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 MTND2P13-201ENST00000577438 1039 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.63□□□□□ -1.51
NKX2-2O95096 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NKX2-2O95096 RFPL4AP6-201ENST00000616792 846 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 AC080188.3-201ENST00000624842 748 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 AC111152.1-202ENST00000635848 339 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX2-2O95096 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX2-2O95096 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.63□□□□□ -1.51
NKX2-2O95096 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NKX2-2O95096 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX2-2O95096 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.63□□□□□ -1.51
NKX2-2O95096 AC011503.2-201ENST00000594230 1500 ntBASIC5.63□□□□□ -1.51
NKX2-2O95096 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX2-2O95096 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX2-2O95096 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
NKX2-2O95096 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX2-2O95096 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-2O95096 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
NKX2-2O95096 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.62□□□□□ -1.51
NKX2-2O95096 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NKX2-2O95096 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-2O95096 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.62□□□□□ -1.51
NKX2-2O95096 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-2O95096 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-2O95096 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-2O95096 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-2O95096 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-2O95096 AL662795.2-201ENST00000624252 3706 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
NKX2-2O95096 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
NKX2-2O95096 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
NKX2-2O95096 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
NKX2-2O95096 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.62□□□□□ -1.51
NKX2-2O95096 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.62□□□□□ -1.51
NKX2-2O95096 OR13C3-201ENST00000374781 1108 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-2O95096 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-2O95096 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-2O95096 RNU4-64P-201ENST00000410795 131 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.62□□□□□ -1.51
NKX2-2O95096 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.62□□□□□ -1.51
NKX2-2O95096 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.62□□□□□ -1.51
NKX2-2O95096 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.62□□□□□ -1.51
NKX2-2O95096 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.62□□□□□ -1.51
NKX2-2O95096 RPL12P12-201ENST00000424633 501 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.62□□□□□ -1.51
NKX2-2O95096 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.62□□□□□ -1.51
NKX2-2O95096 AL606490.7-201ENST00000433136 191 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 AP000949.1-201ENST00000438328 629 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 AL390879.1-201ENST00000439143 386 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 TRIM60P16-201ENST00000444048 694 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.62□□□□□ -1.51
NKX2-2O95096 AL157884.3-201ENST00000448273 1184 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 PPIAP7-201ENST00000454070 489 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 AC104629.2-201ENST00000468627 598 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 AC124945.1-201ENST00000485133 188 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.62□□□□□ -1.51
NKX2-2O95096 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.62□□□□□ -1.51
NKX2-2O95096 AC092349.1-201ENST00000504903 310 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 AC091874.2-201ENST00000505889 720 ntBASIC5.62□□□□□ -1.51
NKX2-2O95096 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.62□□□□□ -1.51
NKX2-2O95096 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms