Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RNU6-784P-201ENST00000384330 106 ntBASIC8.63□□□□□ -1.03
RNF40O75150 AC121334.1-201ENST00000396414 802 ntBASIC8.63□□□□□ -1.03
RNF40O75150 MORF4L1P1-201ENST00000404582 967 ntBASIC8.63□□□□□ -1.03
RNF40O75150 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC8.63□□□□□ -1.03
RNF40O75150 PRELID1P2-201ENST00000407805 396 ntBASIC8.63□□□□□ -1.03
RNF40O75150 ERMN-204ENST00000409925 556 ntTSL 4 BASIC8.63□□□□□ -1.03
RNF40O75150 HMGB3P20-201ENST00000417997 600 ntBASIC8.63□□□□□ -1.03
RNF40O75150 AL389915.1-201ENST00000422463 466 ntBASIC8.63□□□□□ -1.03
RNF40O75150 ELOBP4-201ENST00000423418 296 ntBASIC8.63□□□□□ -1.03
RNF40O75150 AC093084.1-201ENST00000424233 687 ntBASIC8.63□□□□□ -1.03
RNF40O75150 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC8.63□□□□□ -1.03
RNF40O75150 AL356387.1-201ENST00000426321 476 ntTSL 3 BASIC8.63□□□□□ -1.03
RNF40O75150 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC8.63□□□□□ -1.03
RNF40O75150 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC8.63□□□□□ -1.03
RNF40O75150 RN7SL563P-201ENST00000481233 298 ntBASIC8.63□□□□□ -1.03
RNF40O75150 RN7SL241P-201ENST00000482973 236 ntBASIC8.63□□□□□ -1.03
RNF40O75150 RN7SL862P-201ENST00000491550 298 ntBASIC8.63□□□□□ -1.03
RNF40O75150 RPL22-208ENST00000497965 786 ntTSL 2 BASIC8.63□□□□□ -1.03
RNF40O75150 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC8.63□□□□□ -1.03
RNF40O75150 AC008629.2-201ENST00000503783 483 ntBASIC8.63□□□□□ -1.03
RNF40O75150 AC021146.2-201ENST00000504736 556 ntBASIC8.63□□□□□ -1.03
RNF40O75150 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC8.63□□□□□ -1.03
RNF40O75150 AC008868.1-201ENST00000509786 737 ntBASIC8.63□□□□□ -1.03
RNF40O75150 AC010486.1-201ENST00000511793 424 ntBASIC8.63□□□□□ -1.03
RNF40O75150 snoU109.5-201ENST00000516231 132 ntBASIC8.63□□□□□ -1.03
RNF40O75150 Y_RNA.693-201ENST00000516641 110 ntBASIC8.63□□□□□ -1.03
RNF40O75150 AC105029.1-201ENST00000520250 669 ntBASIC8.63□□□□□ -1.03
RNF40O75150 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC8.63□□□□□ -1.03
RNF40O75150 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC8.63□□□□□ -1.03
RNF40O75150 AL512310.1-201ENST00000548639 172 ntBASIC8.63□□□□□ -1.03
RNF40O75150 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC8.63□□□□□ -1.03
RNF40O75150 AC025678.1-201ENST00000567861 338 ntBASIC8.63□□□□□ -1.03
RNF40O75150 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC8.63□□□□□ -1.03
RNF40O75150 MIR3171-201ENST00000584270 74 ntBASIC8.63□□□□□ -1.03
RNF40O75150 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC8.63□□□□□ -1.03
RNF40O75150 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC8.63□□□□□ -1.03
RNF40O75150 AC020914.6-201ENST00000594327 272 ntBASIC8.63□□□□□ -1.03
RNF40O75150 AC105429.2-201ENST00000610567 517 ntBASIC8.63□□□□□ -1.03
RNF40O75150 AC073254.1-206ENST00000617813 907 ntTSL 5 BASIC8.63□□□□□ -1.03
RNF40O75150 AC074029.3-201ENST00000618623 312 ntBASIC8.63□□□□□ -1.03
RNF40O75150 AL139089.1-201ENST00000620372 975 ntBASIC8.63□□□□□ -1.03
RNF40O75150 AC087885.1-201ENST00000641910 848 ntBASIC8.63□□□□□ -1.03
RNF40O75150 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RNF40O75150 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
RNF40O75150 HYDIN2-203ENST00000614586 13885 ntBASIC8.63□□□□□ -1.03
RNF40O75150 CPEB4-209ENST00000522336 1551 ntTSL 5 BASIC8.63□□□□□ -1.03
RNF40O75150 AL080317.3-201ENST00000607434 4315 ntBASIC8.63□□□□□ -1.03
RNF40O75150 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RNF40O75150 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
RNF40O75150 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RNF40O75150 TOPORSLP1-201ENST00000467693 2102 ntBASIC8.63□□□□□ -1.03
RNF40O75150 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RNF40O75150 FMO10P-201ENST00000455032 1493 ntBASIC8.63□□□□□ -1.03
RNF40O75150 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC8.63□□□□□ -1.03
RNF40O75150 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
RNF40O75150 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RNF40O75150 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
RNF40O75150 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
RNF40O75150 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RNF40O75150 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RNF40O75150 DCAF4-212ENST00000553457 2896 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RNF40O75150 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
RNF40O75150 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RNF40O75150 VN2R3P-201ENST00000422626 1412 ntBASIC8.63□□□□□ -1.03
RNF40O75150 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
RNF40O75150 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
RNF40O75150 PARP1P1-201ENST00000413631 3026 ntBASIC8.62□□□□□ -1.03
RNF40O75150 EEF1A1P10-201ENST00000475365 1390 ntBASIC8.62□□□□□ -1.03
RNF40O75150 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
RNF40O75150 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC8.62□□□□□ -1.03
RNF40O75150 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
RNF40O75150 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC8.62□□□□□ -1.03
RNF40O75150 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RNF40O75150 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
RNF40O75150 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC8.62□□□□□ -1.03
RNF40O75150 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
RNF40O75150 Y_RNA.67-201ENST00000362870 100 ntBASIC8.62□□□□□ -1.03
RNF40O75150 Y_RNA.133-201ENST00000363428 110 ntBASIC8.62□□□□□ -1.03
RNF40O75150 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC8.62□□□□□ -1.03
RNF40O75150 Y_RNA.422-201ENST00000384054 114 ntBASIC8.62□□□□□ -1.03
RNF40O75150 RNU6-574P-201ENST00000384265 107 ntBASIC8.62□□□□□ -1.03
RNF40O75150 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
RNF40O75150 AL355375.1-201ENST00000405686 392 ntBASIC8.62□□□□□ -1.03
RNF40O75150 AL603908.1-201ENST00000406098 201 ntBASIC8.62□□□□□ -1.03
RNF40O75150 IGLC6-201ENST00000410078 317 ntBASIC8.62□□□□□ -1.03
RNF40O75150 RN7SKP39-201ENST00000410773 322 ntBASIC8.62□□□□□ -1.03
RNF40O75150 AC009319.1-201ENST00000411493 754 ntBASIC8.62□□□□□ -1.03
RNF40O75150 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC8.62□□□□□ -1.03
RNF40O75150 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC8.62□□□□□ -1.03
RNF40O75150 AL031733.1-201ENST00000422817 455 ntBASIC8.62□□□□□ -1.03
RNF40O75150 OFD1P12Y-201ENST00000427963 1207 ntBASIC8.62□□□□□ -1.03
RNF40O75150 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC8.62□□□□□ -1.03
RNF40O75150 AC007683.1-201ENST00000432746 591 ntBASIC8.62□□□□□ -1.03
RNF40O75150 FUNDC2P4-201ENST00000441207 421 ntBASIC8.62□□□□□ -1.03
RNF40O75150 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC8.62□□□□□ -1.03
RNF40O75150 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC8.62□□□□□ -1.03
RNF40O75150 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
RNF40O75150 ARPC3P2-201ENST00000457786 533 ntBASIC8.62□□□□□ -1.03
RNF40O75150 NDUFB4P1-201ENST00000462398 381 ntBASIC8.62□□□□□ -1.03
RNF40O75150 AC130509.1-201ENST00000464158 433 ntBASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms