Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SCN2BO60939 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN2BO60939 RBPJP7-201ENST00000442803 1447 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 RBPJP5-201ENST00000449433 1447 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 AL158152.1-201ENST00000602652 1435 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.57□□□□□ -1.52
SCN2BO60939 AC009962.1-201ENST00000567327 3813 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN2BO60939 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN2BO60939 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN2BO60939 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SCN2BO60939 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN2BO60939 MIR133A2-201ENST00000347538 102 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 RN7SKP186-201ENST00000365371 303 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.57□□□□□ -1.52
SCN2BO60939 RPS4XP5-201ENST00000419038 768 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 KIF4CP-201ENST00000422742 1279 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 AL139158.1-201ENST00000424719 340 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 AL445466.1-201ENST00000448432 357 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 AC004129.2-201ENST00000457229 287 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 AC023245.1-201ENST00000468501 517 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 AC079080.1-201ENST00000479841 822 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 AC006539.1-201ENST00000481419 501 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 AP002453.1-201ENST00000492327 668 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 AC108103.1-201ENST00000511286 446 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 RNA5SP441-201ENST00000516809 88 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.57□□□□□ -1.52
SCN2BO60939 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.57□□□□□ -1.52
SCN2BO60939 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.57□□□□□ -1.52
SCN2BO60939 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SCN2BO60939 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.57□□□□□ -1.52
SCN2BO60939 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.57□□□□□ -1.52
SCN2BO60939 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.57□□□□□ -1.52
SCN2BO60939 AL078601.3-201ENST00000573303 535 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 ARGFXP2-201ENST00000579304 949 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.57□□□□□ -1.52
SCN2BO60939 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.57□□□□□ -1.52
SCN2BO60939 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.57□□□□□ -1.52
SCN2BO60939 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 AL445670.1-201ENST00000618889 801 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 AC020633.1-201ENST00000468439 2247 ntBASIC5.57□□□□□ -1.52
SCN2BO60939 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN2BO60939 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN2BO60939 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.57□□□□□ -1.52
SCN2BO60939 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SCN2BO60939 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SCN2BO60939 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SCN2BO60939 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SCN2BO60939 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SCN2BO60939 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.56□□□□□ -1.52
SCN2BO60939 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SCN2BO60939 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.56□□□□□ -1.52
SCN2BO60939 MRPS21P2-201ENST00000424704 264 ntBASIC5.56□□□□□ -1.52
SCN2BO60939 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.56□□□□□ -1.52
SCN2BO60939 GAPDHP59-201ENST00000435908 267 ntBASIC5.56□□□□□ -1.52
SCN2BO60939 AC007383.1-201ENST00000445875 636 ntBASIC5.56□□□□□ -1.52
SCN2BO60939 AC073476.1-201ENST00000452854 407 ntBASIC5.56□□□□□ -1.52
SCN2BO60939 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.56□□□□□ -1.52
SCN2BO60939 SNRPCP3-201ENST00000474888 476 ntBASIC5.56□□□□□ -1.52
SCN2BO60939 AC008629.2-201ENST00000503783 483 ntBASIC5.56□□□□□ -1.52
SCN2BO60939 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.56□□□□□ -1.52
SCN2BO60939 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.56□□□□□ -1.52
SCN2BO60939 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.56□□□□□ -1.52
SCN2BO60939 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.56□□□□□ -1.52
SCN2BO60939 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.56□□□□□ -1.52
SCN2BO60939 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.56□□□□□ -1.52
SCN2BO60939 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.56□□□□□ -1.52
SCN2BO60939 AP005119.1-201ENST00000580956 292 ntBASIC5.56□□□□□ -1.52
SCN2BO60939 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.56□□□□□ -1.52
SCN2BO60939 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.56□□□□□ -1.52
SCN2BO60939 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.56□□□□□ -1.52
SCN2BO60939 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SCN2BO60939 AC092681.3-201ENST00000609463 678 ntBASIC5.56□□□□□ -1.52
SCN2BO60939 MTCO1P28-201ENST00000574177 1528 ntBASIC5.56□□□□□ -1.52
SCN2BO60939 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SCN2BO60939 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SCN2BO60939 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SCN2BO60939 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.56□□□□□ -1.52
SCN2BO60939 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.56□□□□□ -1.52
SCN2BO60939 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN2BO60939 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SCN2BO60939 AC015799.1-201ENST00000622996 3122 ntBASIC5.56□□□□□ -1.52
SCN2BO60939 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN2BO60939 CDY11P-201ENST00000447168 1651 ntBASIC5.56□□□□□ -1.52
SCN2BO60939 AC004076.2-201ENST00000620532 3323 ntBASIC5.56□□□□□ -1.52
SCN2BO60939 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
SCN2BO60939 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCN2BO60939 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCN2BO60939 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCN2BO60939 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCN2BO60939 PSG10P-201ENST00000501199 1500 ntBASIC5.55□□□□□ -1.52
SCN2BO60939 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.55□□□□□ -1.52
SCN2BO60939 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCN2BO60939 RN7SKP250-201ENST00000363924 321 ntBASIC5.55□□□□□ -1.52
SCN2BO60939 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
SCN2BO60939 YWHAZP6-201ENST00000399764 738 ntBASIC5.55□□□□□ -1.52
SCN2BO60939 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.55□□□□□ -1.52
SCN2BO60939 AC242426.1-201ENST00000435270 960 ntBASIC5.55□□□□□ -1.52
SCN2BO60939 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SCN2BO60939 AL353662.1-201ENST00000439099 327 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms