Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
SDCBPO00560 AC063952.1-203ENST00000634410 658 ntBASIC4.93□□□□□ -1.62
SDCBPO00560 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.93□□□□□ -1.62
SDCBPO00560 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.93□□□□□ -1.62
SDCBPO00560 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SDCBPO00560 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.93□□□□□ -1.62
SDCBPO00560 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SDCBPO00560 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
SDCBPO00560 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC4.93□□□□□ -1.62
SDCBPO00560 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SDCBPO00560 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.93□□□□□ -1.62
SDCBPO00560 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
SDCBPO00560 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SDCBPO00560 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.93□□□□□ -1.62
SDCBPO00560 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
SDCBPO00560 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.92□□□□□ -1.62
SDCBPO00560 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SDCBPO00560 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SDCBPO00560 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SDCBPO00560 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SDCBPO00560 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SDCBPO00560 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SDCBPO00560 RNA5SP110-201ENST00000362638 115 ntBASIC4.92□□□□□ -1.62
SDCBPO00560 RNA5SP279-201ENST00000365513 117 ntBASIC4.92□□□□□ -1.62
SDCBPO00560 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SDCBPO00560 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SDCBPO00560 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SDCBPO00560 RBBP4P5-201ENST00000398583 1266 ntBASIC4.92□□□□□ -1.62
SDCBPO00560 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SDCBPO00560 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.92□□□□□ -1.62
SDCBPO00560 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.92□□□□□ -1.62
SDCBPO00560 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.92□□□□□ -1.62
SDCBPO00560 AC096775.1-201ENST00000437724 448 ntBASIC4.92□□□□□ -1.62
SDCBPO00560 OR52I1-201ENST00000450052 1050 ntBASIC4.92□□□□□ -1.62
SDCBPO00560 AC008629.2-201ENST00000503783 483 ntBASIC4.92□□□□□ -1.62
SDCBPO00560 GLUD1P3-202ENST00000508551 200 ntBASIC4.92□□□□□ -1.62
SDCBPO00560 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.92□□□□□ -1.62
SDCBPO00560 OR4A42P-201ENST00000531397 938 ntBASIC4.92□□□□□ -1.62
SDCBPO00560 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.92□□□□□ -1.62
SDCBPO00560 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.92□□□□□ -1.62
SDCBPO00560 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.92□□□□□ -1.62
SDCBPO00560 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.92□□□□□ -1.62
SDCBPO00560 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.92□□□□□ -1.62
SDCBPO00560 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.92□□□□□ -1.62
SDCBPO00560 AC138207.8-204ENST00000579588 527 ntBASIC4.92□□□□□ -1.62
SDCBPO00560 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.92□□□□□ -1.62
SDCBPO00560 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC4.92□□□□□ -1.62
SDCBPO00560 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC4.92□□□□□ -1.62
SDCBPO00560 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.92□□□□□ -1.62
SDCBPO00560 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.92□□□□□ -1.62
SDCBPO00560 AC015712.7-201ENST00000615211 635 ntBASIC4.92□□□□□ -1.62
SDCBPO00560 uc_338.31-201ENST00000615595 186 ntBASIC4.92□□□□□ -1.62
SDCBPO00560 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.92□□□□□ -1.62
SDCBPO00560 MIR6721-201ENST00000617181 87 ntBASIC4.92□□□□□ -1.62
SDCBPO00560 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.92□□□□□ -1.62
SDCBPO00560 AL357562.1-201ENST00000624911 609 ntBASIC4.92□□□□□ -1.62
SDCBPO00560 AC005618.4-201ENST00000625053 554 ntBASIC4.92□□□□□ -1.62
SDCBPO00560 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
SDCBPO00560 AC137056.2-201ENST00000624055 1958 ntBASIC4.92□□□□□ -1.62
SDCBPO00560 GNL2P1-201ENST00000451274 2190 ntBASIC4.92□□□□□ -1.62
SDCBPO00560 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SDCBPO00560 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SDCBPO00560 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SDCBPO00560 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SDCBPO00560 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SDCBPO00560 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SDCBPO00560 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SDCBPO00560 AP005435.3-201ENST00000531260 3198 ntBASIC4.92□□□□□ -1.62
SDCBPO00560 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SDCBPO00560 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SDCBPO00560 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC4.91□□□□□ -1.62
SDCBPO00560 MFSD8-239ENST00000641590 2479 ntBASIC4.91□□□□□ -1.62
SDCBPO00560 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.91□□□□□ -1.62
SDCBPO00560 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.91□□□□□ -1.62
SDCBPO00560 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.91□□□□□ -1.62
SDCBPO00560 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SDCBPO00560 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SDCBPO00560 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SDCBPO00560 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
SDCBPO00560 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.91□□□□□ -1.62
SDCBPO00560 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SDCBPO00560 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SDCBPO00560 RN7SKP185-201ENST00000362813 326 ntBASIC4.91□□□□□ -1.62
SDCBPO00560 RN7SKP78-201ENST00000364711 318 ntBASIC4.91□□□□□ -1.62
SDCBPO00560 RNA5SP91-201ENST00000390902 119 ntBASIC4.91□□□□□ -1.62
SDCBPO00560 AC009506.2-201ENST00000420635 840 ntBASIC4.91□□□□□ -1.62
SDCBPO00560 MRPS21P2-201ENST00000424704 264 ntBASIC4.91□□□□□ -1.62
SDCBPO00560 AC023141.3-201ENST00000436698 278 ntBASIC4.91□□□□□ -1.62
SDCBPO00560 RPS12P17-201ENST00000438591 377 ntBASIC4.91□□□□□ -1.62
SDCBPO00560 AL353662.1-201ENST00000439099 327 ntBASIC4.91□□□□□ -1.62
SDCBPO00560 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.91□□□□□ -1.62
SDCBPO00560 AC098847.1-201ENST00000473094 348 ntBASIC4.91□□□□□ -1.62
SDCBPO00560 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SDCBPO00560 OR7E157P-201ENST00000494376 911 ntBASIC4.91□□□□□ -1.62
SDCBPO00560 AC106822.1-201ENST00000502647 526 ntBASIC4.91□□□□□ -1.62
SDCBPO00560 OR7E99P-201ENST00000505750 922 ntBASIC4.91□□□□□ -1.62
SDCBPO00560 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.91□□□□□ -1.62
SDCBPO00560 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.91□□□□□ -1.62
SDCBPO00560 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC4.91□□□□□ -1.62
SDCBPO00560 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms