Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SRRM4A7MD48 AL139805.1-201ENST00000407837 289 ntBASIC4.89□□□□□ -1.63
SRRM4A7MD48 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SRRM4A7MD48 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 RSL24D1P8-201ENST00000434442 492 ntBASIC4.89□□□□□ -1.63
SRRM4A7MD48 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 MRPS21P3-201ENST00000436696 262 ntBASIC4.89□□□□□ -1.63
SRRM4A7MD48 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SRRM4A7MD48 BTBD7P2-201ENST00000441962 620 ntBASIC4.89□□□□□ -1.63
SRRM4A7MD48 AL162739.1-201ENST00000450606 307 ntBASIC4.89□□□□□ -1.63
SRRM4A7MD48 MTND6P32-201ENST00000457611 483 ntBASIC4.89□□□□□ -1.63
SRRM4A7MD48 AC124945.1-201ENST00000485133 188 ntBASIC4.89□□□□□ -1.63
SRRM4A7MD48 RPL23AP40-201ENST00000487630 390 ntBASIC4.89□□□□□ -1.63
SRRM4A7MD48 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SRRM4A7MD48 AC108157.1-201ENST00000510511 539 ntBASIC4.89□□□□□ -1.63
SRRM4A7MD48 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SRRM4A7MD48 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 AC021269.1-201ENST00000526860 705 ntBASIC4.89□□□□□ -1.63
SRRM4A7MD48 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 HMGB1P51-201ENST00000605166 638 ntBASIC4.89□□□□□ -1.63
SRRM4A7MD48 AC012213.4-201ENST00000606457 354 ntBASIC4.89□□□□□ -1.63
SRRM4A7MD48 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 AL133370.2-201ENST00000619934 439 ntBASIC4.89□□□□□ -1.63
SRRM4A7MD48 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 AC010325.3-201ENST00000641084 394 ntBASIC4.89□□□□□ -1.63
SRRM4A7MD48 SELE-204ENST00000367776 3576 ntTSL 5 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 SELE-205ENST00000367777 3576 ntTSL 5 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SRRM4A7MD48 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SRRM4A7MD48 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 AC092070.2-203ENST00000598377 3644 ntBASIC4.89□□□□□ -1.63
SRRM4A7MD48 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SRRM4A7MD48 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SRRM4A7MD48 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SRRM4A7MD48 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SRRM4A7MD48 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 DCN-218ENST00000551354 2924 ntTSL 3 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SRRM4A7MD48 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SRRM4A7MD48 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SRRM4A7MD48 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC4.89□□□□□ -1.63
SRRM4A7MD48 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SRRM4A7MD48 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
SRRM4A7MD48 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SRRM4A7MD48 GDA-209ENST00000545168 5362 ntTSL 2 BASIC4.88□□□□□ -1.63
SRRM4A7MD48 MSL3P1-202ENST00000440028 1468 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC4.88□□□□□ -1.63
SRRM4A7MD48 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SRRM4A7MD48 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SRRM4A7MD48 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SRRM4A7MD48 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
SRRM4A7MD48 RNU105B-201ENST00000364478 208 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SRRM4A7MD48 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SRRM4A7MD48 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SRRM4A7MD48 AL096800.1-201ENST00000405326 893 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 AMZ2P2-201ENST00000406819 1057 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 RNA5SP198-201ENST00000410376 127 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 RN7SKP108-201ENST00000411367 328 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 AL096829.1-201ENST00000413677 457 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 RPS15AP30-201ENST00000420976 390 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 GLUD1P9-201ENST00000420997 1173 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 AL356806.1-201ENST00000422524 916 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.88□□□□□ -1.63
SRRM4A7MD48 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 PSMD10P2-201ENST00000432890 672 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 AL390879.1-201ENST00000439143 386 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 AL606490.8-201ENST00000441624 319 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 AL356121.1-201ENST00000442911 156 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.88□□□□□ -1.63
SRRM4A7MD48 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.88□□□□□ -1.63
SRRM4A7MD48 RPL12P30-201ENST00000488389 499 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 CCDC11P1-201ENST00000503137 1162 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SRRM4A7MD48 GUSBP9-201ENST00000510138 584 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 SNX18P25-201ENST00000510539 758 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.88□□□□□ -1.63
SRRM4A7MD48 AC087272.1-201ENST00000523624 533 ntBASIC4.88□□□□□ -1.63
SRRM4A7MD48 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SRRM4A7MD48 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms