Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 HSFY7P-201ENST00000432672 318 ntBASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 HSFY8P-201ENST00000437934 318 ntBASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 DNAJC19P5-201ENST00000443295 316 ntBASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 RSU1P1-201ENST00000453416 441 ntBASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 HSFY5P-201ENST00000453726 309 ntBASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 FRG2FP-204ENST00000453982 852 ntBASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 RPL12P39-201ENST00000455456 496 ntBASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 OR7E22P-201ENST00000478335 1035 ntBASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 AC093719.1-201ENST00000480427 441 ntBASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 SNRPCP11-201ENST00000492453 205 ntBASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 AC090058.1-201ENST00000498788 435 ntBASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 OR51A1P-201ENST00000511110 946 ntBASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 OR7E10P-201ENST00000526420 991 ntBASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 MRPS21P9-201ENST00000571150 257 ntBASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 AC073333.2-201ENST00000603589 769 ntBASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 AC015819.1-201ENST00000613588 663 ntBASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 AC073488.6-201ENST00000632293 754 ntBASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 AC006453.5-201ENST00000636451 619 ntBASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 AL513548.1-201ENST00000562904 1724 ntBASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.05□□□□□ -1.44
TCRBV7S3A2A0A539 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 PSG10P-201ENST00000501199 1500 ntBASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 MSL3P1-202ENST00000440028 1468 ntBASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 RNU1-134P-201ENST00000362935 165 ntBASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 RNU6-618P-201ENST00000363518 112 ntBASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 RN7SKP128-201ENST00000364270 303 ntBASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 RNU6-1176P-201ENST00000390955 107 ntBASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 AL589994.1-201ENST00000404962 340 ntBASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 RPS7P8-201ENST00000418311 581 ntBASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 RPL12P12-201ENST00000424633 501 ntBASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 MTND4LP14-201ENST00000429447 288 ntBASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 SCAND3P1-201ENST00000439854 1060 ntBASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 PFN1P6-201ENST00000476786 399 ntBASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 MIR2117-201ENST00000516780 80 ntBASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 NPIPB14P-203ENST00000532298 987 ntBASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 AC007346.2-201ENST00000564816 892 ntBASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 AC107993.1-201ENST00000591343 684 ntBASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 OR4H6P-202ENST00000603819 340 ntBASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 AC135803.1-201ENST00000608748 565 ntBASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 AC106858.1-201ENST00000637497 429 ntBASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 AC099654.15-201ENST00000639802 509 ntBASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TCRBV7S3A2A0A539 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.03□□□□□ -1.44
TCRBV7S3A2A0A539 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms