Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 ZNF300P1-201ENST00000356555 1822 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 CETN2-201ENST00000370277 1454 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 Y_RNA.573-201ENST00000384763 105 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 MT-TD-201ENST00000387419 68 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 RNA5SP185-201ENST00000390963 114 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 H2AFZP3-201ENST00000394213 387 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AL161909.1-201ENST00000397390 712 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 SNORA11C-201ENST00000408532 129 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 NUP35P2-201ENST00000416748 943 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AIMP1P1-201ENST00000418670 937 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 OFD1P18Y-201ENST00000420889 959 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 VN1R20P-201ENST00000425215 966 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AL356387.1-201ENST00000426321 476 ntTSL 3 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 BSNDP4-201ENST00000436076 388 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AL450263.2-201ENST00000439400 589 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AL033528.1-201ENST00000453780 140 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 DNAJB5P1-201ENST00000454004 806 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AC013267.1-201ENST00000458227 267 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 LARP1BP2-201ENST00000486594 519 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AC018639.1-201ENST00000492994 442 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AC027607.1-201ENST00000503034 534 ntTSL 3 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AC091133.4-201ENST00000511142 308 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 RNU6-875P-201ENST00000516488 106 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AC239860.2-201ENST00000525886 270 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 NPIPB14P-203ENST00000532298 987 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 PLA2G1B-203ENST00000549767 562 ntTSL 2 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AC137768.1-201ENST00000549998 553 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AC069240.2-201ENST00000550242 609 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 CENPUP2-201ENST00000555897 1186 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AC087645.1-201ENST00000588528 291 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AC107214.2-201ENST00000608204 634 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AL109933.4-201ENST00000612111 157 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AL133351.5-201ENST00000612789 106 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 SLC20A1P2-201ENST00000618036 966 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AC009033.1-201ENST00000624279 431 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AL359697.1-201ENST00000624879 587 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 MIR193BHG-210ENST00000641327 515 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AL022163.1-201ENST00000430261 1569 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 MTND4P16-201ENST00000466108 1367 ntBASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC7.57□□□□□ -1.2
PCDHGA11Q9Y5H2 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 AC241584.2-201ENST00000637142 2090 ntBASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PCDHGA11Q9Y5H2 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms