Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 AC025458.1-201ENST00000506046 166 ntBASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 AC090958.1-201ENST00000511122 351 ntBASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 COX6B1P4-201ENST00000519826 484 ntBASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 RN7SL475P-201ENST00000583379 298 ntBASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 DNAJC19P3-201ENST00000594491 331 ntBASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 AC084824.5-201ENST00000612009 413 ntBASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 MIR4302-201ENST00000638058 60 ntBASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 TNPO1P2-201ENST00000426249 2665 ntBASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.74□□□□□ -1.33
SSX2IPQ9Y2D8 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AC005225.5-201ENST00000623547 2225 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 RNA5SP188-201ENST00000362916 129 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 RN7SKP186-201ENST00000365371 303 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AL589655.1-201ENST00000405398 482 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 REG1CP-206ENST00000447469 496 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 HIGD1AP16-201ENST00000450986 258 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AC018635.1-201ENST00000468292 1030 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 IGKV3D-25-201ENST00000519599 235 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 IGKV3D-34-201ENST00000522638 302 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 KCTD9P4-201ENST00000526766 1166 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AP003049.1-201ENST00000529418 457 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AC079905.1-201ENST00000549280 475 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AC007956.1-201ENST00000555623 542 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AC011497.2-201ENST00000600255 639 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AC125494.2-201ENST00000602431 657 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 RPAP2P1-201ENST00000603626 1168 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AC110792.4-201ENST00000609843 298 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AC117490.2-201ENST00000610042 594 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AL512506.1-201ENST00000613918 449 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AC245014.3-201ENST00000618589 347 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AC022306.3-201ENST00000619930 550 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AL731556.1-201ENST00000394628 3711 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SSX2IPQ9Y2D8 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AP002370.1-201ENST00000528055 1602 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 AL512283.1-201ENST00000606756 1384 ntBASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.72□□□□□ -1.33
SSX2IPQ9Y2D8 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms