Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
UPF2Q9HAU5 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC7.09□□□□□ -1.27
UPF2Q9HAU5 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
UPF2Q9HAU5 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
UPF2Q9HAU5 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC7.09□□□□□ -1.27
UPF2Q9HAU5 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
UPF2Q9HAU5 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
UPF2Q9HAU5 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 EEF1A1P33-201ENST00000554413 1362 ntBASIC7.08□□□□□ -1.28
UPF2Q9HAU5 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 AC092681.1-201ENST00000297369 291 ntBASIC7.08□□□□□ -1.28
UPF2Q9HAU5 RNU1-134P-201ENST00000362935 165 ntBASIC7.08□□□□□ -1.28
UPF2Q9HAU5 RN7SKP69-201ENST00000365390 305 ntBASIC7.08□□□□□ -1.28
UPF2Q9HAU5 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 RNU6-316P-201ENST00000391027 107 ntBASIC7.08□□□□□ -1.28
UPF2Q9HAU5 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 AC010086.1-201ENST00000437359 1052 ntBASIC7.08□□□□□ -1.28
UPF2Q9HAU5 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 SNORA74.1-201ENST00000516320 180 ntBASIC7.08□□□□□ -1.28
UPF2Q9HAU5 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 MIR212-201ENST00000586026 110 ntBASIC7.08□□□□□ -1.28
UPF2Q9HAU5 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 AL139099.4-201ENST00000614802 114 ntBASIC7.08□□□□□ -1.28
UPF2Q9HAU5 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 AC007938.2-201ENST00000604666 2634 ntBASIC7.08□□□□□ -1.28
UPF2Q9HAU5 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC7.08□□□□□ -1.28
UPF2Q9HAU5 AP001029.2-203ENST00000589795 4910 ntBASIC7.07□□□□□ -1.28
UPF2Q9HAU5 AC117409.1-201ENST00000470499 1310 ntBASIC7.07□□□□□ -1.28
UPF2Q9HAU5 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC7.07□□□□□ -1.28
UPF2Q9HAU5 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
UPF2Q9HAU5 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
UPF2Q9HAU5 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
UPF2Q9HAU5 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
UPF2Q9HAU5 AC121334.1-201ENST00000396414 802 ntBASIC7.07□□□□□ -1.28
UPF2Q9HAU5 GAPDHP19-201ENST00000431768 1005 ntBASIC7.07□□□□□ -1.28
UPF2Q9HAU5 RPS12P17-201ENST00000438591 377 ntBASIC7.07□□□□□ -1.28
UPF2Q9HAU5 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC7.07□□□□□ -1.28
UPF2Q9HAU5 WDR82P2-201ENST00000444540 928 ntBASIC7.07□□□□□ -1.28
UPF2Q9HAU5 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.07□□□□□ -1.28
UPF2Q9HAU5 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC7.07□□□□□ -1.28
UPF2Q9HAU5 AC023245.1-201ENST00000468501 517 ntBASIC7.07□□□□□ -1.28
UPF2Q9HAU5 RPL12P30-201ENST00000488389 499 ntBASIC7.07□□□□□ -1.28
UPF2Q9HAU5 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
UPF2Q9HAU5 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.07□□□□□ -1.28
UPF2Q9HAU5 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC7.07□□□□□ -1.28
UPF2Q9HAU5 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC7.07□□□□□ -1.28
UPF2Q9HAU5 AC063977.7-201ENST00000594454 337 ntBASIC7.07□□□□□ -1.28
UPF2Q9HAU5 MIR6070-201ENST00000613967 103 ntBASIC7.07□□□□□ -1.28
UPF2Q9HAU5 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
UPF2Q9HAU5 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
UPF2Q9HAU5 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
UPF2Q9HAU5 AC012254.3-201ENST00000591183 2117 ntBASIC7.07□□□□□ -1.28
UPF2Q9HAU5 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC7.07□□□□□ -1.28
UPF2Q9HAU5 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC7.07□□□□□ -1.28
UPF2Q9HAU5 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
UPF2Q9HAU5 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.07□□□□□ -1.28
UPF2Q9HAU5 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC7.06□□□□□ -1.28
UPF2Q9HAU5 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
UPF2Q9HAU5 AC137056.2-201ENST00000624055 1958 ntBASIC7.06□□□□□ -1.28
UPF2Q9HAU5 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
UPF2Q9HAU5 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
UPF2Q9HAU5 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.06□□□□□ -1.28
UPF2Q9HAU5 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
UPF2Q9HAU5 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
UPF2Q9HAU5 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
UPF2Q9HAU5 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
UPF2Q9HAU5 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.06□□□□□ -1.28
UPF2Q9HAU5 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7.06□□□□□ -1.28
UPF2Q9HAU5 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.06□□□□□ -1.28
UPF2Q9HAU5 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC7.06□□□□□ -1.28
UPF2Q9HAU5 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC7.06□□□□□ -1.28
UPF2Q9HAU5 AC131935.1-201ENST00000524621 333 ntBASIC7.06□□□□□ -1.28
UPF2Q9HAU5 NPIPB14P-203ENST00000532298 987 ntBASIC7.06□□□□□ -1.28
UPF2Q9HAU5 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.06□□□□□ -1.28
UPF2Q9HAU5 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.06□□□□□ -1.28
UPF2Q9HAU5 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
UPF2Q9HAU5 AC145423.1-201ENST00000605712 336 ntBASIC7.06□□□□□ -1.28
UPF2Q9HAU5 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
UPF2Q9HAU5 AC091059.2-201ENST00000623355 614 ntBASIC7.06□□□□□ -1.28
UPF2Q9HAU5 AC073488.3-201ENST00000631611 778 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms