Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AC008410.1-201ENST00000483777 339 ntBASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AC104115.2-201ENST00000523026 687 ntBASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 OR4A6P-201ENST00000534364 970 ntBASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 OR8X1P-201ENST00000534542 869 ntBASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AL512310.9-201ENST00000553311 948 ntBASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 GLRXP2-201ENST00000555594 321 ntBASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 BMS1P7-201ENST00000602440 1052 ntBASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AC024589.2-201ENST00000605642 1294 ntBASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AL589743.6-201ENST00000611025 117 ntBASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 LINC02495-203ENST00000636704 242 ntBASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 SNX18P3-202ENST00000565670 1750 ntBASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AC020656.2-201ENST00000613291 5309 ntBASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM54Q9BYV2 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
TRIM54Q9BYV2 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 AC130360.2-201ENST00000533477 1556 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 SNORD94-201ENST00000386037 137 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 RPL12P23-201ENST00000405880 490 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 RNU6-584P-201ENST00000410350 95 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 CBX1P3-201ENST00000413296 527 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 HMGA1P8-201ENST00000414130 321 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 GPN3P1-201ENST00000423883 535 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 AC114973.1-201ENST00000429057 632 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 H3F3BP1-201ENST00000440551 403 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 RPSAP39-201ENST00000467439 883 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 MARK2P8-201ENST00000476069 952 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 AC139713.1-202ENST00000512366 460 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 RFPL4AP3-201ENST00000515267 345 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 RN7SKP67-201ENST00000515905 235 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 COX6B1P4-201ENST00000519826 484 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 OR9G2P-201ENST00000533326 880 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 AL390877.1-201ENST00000605704 214 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 AC026741.1-201ENST00000605892 482 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 AC004241.3-201ENST00000611728 517 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 AC006927.4-201ENST00000639187 543 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 AC013437.2-201ENST00000639587 677 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 RPL31P11-201ENST00000426558 1558 ntBASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM54Q9BYV2 AC011815.2-201ENST00000618230 2021 ntBASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM54Q9BYV2 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms