Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 RNA5SP435-201ENST00000364044 108 ntBASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 RPS7P8-201ENST00000418311 581 ntBASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 EIF5AP4-201ENST00000441206 465 ntBASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AC015983.1-201ENST00000441577 373 ntBASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 HMGB1P7-201ENST00000450921 612 ntBASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 CST12P-201ENST00000457644 362 ntBASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AC093166.4-201ENST00000457867 318 ntBASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 RPS27P20-201ENST00000492051 246 ntBASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 HSD3BP3-201ENST00000514706 994 ntBASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AC108673.3-201ENST00000609183 335 ntBASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AC015712.7-201ENST00000615211 635 ntBASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AL035661.1-201ENST00000620459 1144 ntBASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AL161912.4-201ENST00000623889 2468 ntBASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AC006600.2-201ENST00000624834 2506 ntBASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AF287957.1-201ENST00000607368 1595 ntBASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AC090220.1-201ENST00000593078 1699 ntBASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 AL355488.2-201ENST00000609909 2850 ntBASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RSPO3Q9BXY4 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 AC087752.1-201ENST00000391360 558 ntBASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 RBBP4P5-201ENST00000398583 1266 ntBASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 RN7SKP29-201ENST00000410957 272 ntBASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 AL389925.1-201ENST00000432257 728 ntBASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 AC104339.1-201ENST00000465478 348 ntBASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 AC128716.1-201ENST00000475129 166 ntBASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 RN7SL193P-201ENST00000491708 276 ntBASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 AC090568.1-201ENST00000509499 856 ntBASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 AC139365.2-201ENST00000517972 253 ntBASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 RN7SL753P-201ENST00000581238 290 ntBASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 AC079315.1-201ENST00000602952 623 ntBASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 AC073592.6-201ENST00000624271 415 ntBASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 AC139426.3-201ENST00000605648 2059 ntBASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
RSPO3Q9BXY4 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 AP004607.3-201ENST00000530354 3915 ntBASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RSPO3Q9BXY4 CASC19-260ENST00000641828 2001 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms