Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 MYL6P5-201ENST00000412707 459 ntBASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 TUBB4BP6-201ENST00000437576 479 ntBASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 snoU13.29-201ENST00000459370 104 ntBASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 RPL7L1P4-201ENST00000513004 707 ntBASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 AC091078.2-201ENST00000557145 559 ntBASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
RPAP1Q9BWH6 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 NMD3P2-201ENST00000421815 761 ntBASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 AL365220.1-201ENST00000432923 399 ntBASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 SNORD95-201ENST00000579879 68 ntBASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 RN7SL787P-201ENST00000613000 284 ntBASIC7.19□□□□□ -1.26
RPAP1Q9BWH6 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 AC130360.2-201ENST00000533477 1556 ntBASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 MARK2P12-201ENST00000420129 585 ntBASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 BX119321.1-201ENST00000428912 797 ntBASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 LDHAP2-201ENST00000437325 985 ntBASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 SDC4P-201ENST00000453285 601 ntBASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 AC128716.1-201ENST00000475129 166 ntBASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 ATP5LP3-201ENST00000514223 304 ntBASIC7.18□□□□□ -1.26
RPAP1Q9BWH6 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms