Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDC6Q99741 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CDC6Q99741 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDC6Q99741 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CDC6Q99741 Y_RNA.169-201ENST00000363745 96 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 PSMA6P1-201ENST00000400275 741 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 CNN3P1-201ENST00000401596 935 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 FCF1P5-201ENST00000406490 482 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 RN7SKP188-201ENST00000410789 317 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 AL008987.1-201ENST00000415528 237 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.72□□□□□ -1.33
CDC6Q99741 GTF2IP2-201ENST00000424290 697 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 C1DP1-201ENST00000426049 402 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 UBE2V1P1-201ENST00000430836 445 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.72□□□□□ -1.33
CDC6Q99741 LSM3P3-201ENST00000436601 306 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 EMC3-AS1-205ENST00000438698 534 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.72□□□□□ -1.33
CDC6Q99741 YWHAZP2-201ENST00000440317 728 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 EIF5AP4-201ENST00000441206 465 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 KATNBL1P3-201ENST00000443475 909 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 SNRPBP1-201ENST00000443634 282 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.72□□□□□ -1.33
CDC6Q99741 CASP3P1-201ENST00000446037 609 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 AC068135.1-201ENST00000446164 246 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 PTENP1-201ENST00000447117 1215 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.72□□□□□ -1.33
CDC6Q99741 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC6.72□□□□□ -1.33
CDC6Q99741 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDC6Q99741 AC234771.3-201ENST00000454984 622 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 USP9YP25-201ENST00000457708 443 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC6.72□□□□□ -1.33
CDC6Q99741 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC6.72□□□□□ -1.33
CDC6Q99741 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.72□□□□□ -1.33
CDC6Q99741 DEFB130C-202ENST00000530001 230 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 OR5AM1P-201ENST00000532136 1032 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CDC6Q99741 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC6.72□□□□□ -1.33
CDC6Q99741 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.72□□□□□ -1.33
CDC6Q99741 MTND4LP24-201ENST00000572277 291 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC6.72□□□□□ -1.33
CDC6Q99741 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.72□□□□□ -1.33
CDC6Q99741 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.72□□□□□ -1.33
CDC6Q99741 AC146944.4-201ENST00000602697 718 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 AC002069.2-201ENST00000603580 883 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 AL022161.1-201ENST00000604390 213 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.72□□□□□ -1.33
CDC6Q99741 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDC6Q99741 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC6.72□□□□□ -1.33
CDC6Q99741 MIR3974-201ENST00000637126 96 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 AC010325.3-201ENST00000641084 394 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 LINC01808-202ENST00000641680 1116 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDC6Q99741 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDC6Q99741 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDC6Q99741 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDC6Q99741 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDC6Q99741 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDC6Q99741 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDC6Q99741 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDC6Q99741 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDC6Q99741 AL669831.5-218ENST00000591702 1873 ntBASIC6.72□□□□□ -1.33
CDC6Q99741 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC6.72□□□□□ -1.33
CDC6Q99741 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDC6Q99741 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDC6Q99741 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDC6Q99741 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CDC6Q99741 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDC6Q99741 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDC6Q99741 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDC6Q99741 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.72□□□□□ -1.33
CDC6Q99741 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDC6Q99741 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CDC6Q99741 MTND4P10-201ENST00000446199 1363 ntBASIC6.71□□□□□ -1.33
CDC6Q99741 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
CDC6Q99741 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CDC6Q99741 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
CDC6Q99741 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC6.71□□□□□ -1.34
CDC6Q99741 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CDC6Q99741 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CDC6Q99741 AL133320.1-201ENST00000621423 2352 ntBASIC6.71□□□□□ -1.34
CDC6Q99741 AL034417.4-202ENST00000642135 2236 ntBASIC6.71□□□□□ -1.34
CDC6Q99741 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDC6Q99741 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CDC6Q99741 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.71□□□□□ -1.34
CDC6Q99741 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
CDC6Q99741 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDC6Q99741 RNA5SP435-201ENST00000364044 108 ntBASIC6.71□□□□□ -1.34
CDC6Q99741 PPIAP26-201ENST00000377951 522 ntBASIC6.71□□□□□ -1.34
CDC6Q99741 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDC6Q99741 RPL23AP59-201ENST00000399415 461 ntBASIC6.71□□□□□ -1.34
CDC6Q99741 AL445238.1-204ENST00000400311 463 ntBASIC6.71□□□□□ -1.34
CDC6Q99741 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.71□□□□□ -1.34
CDC6Q99741 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CDC6Q99741 OR5W1P-201ENST00000423705 938 ntBASIC6.71□□□□□ -1.34
CDC6Q99741 AC021876.1-201ENST00000425959 359 ntBASIC6.71□□□□□ -1.34
CDC6Q99741 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms