Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 AL589863.1-201ENST00000595383 631 ntBASIC6.01□□□□□ -1.45
VMP1Q96GC9 WBP1LP12-201ENST00000604449 331 ntBASIC6.01□□□□□ -1.45
VMP1Q96GC9 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 AL122023.1-201ENST00000622847 530 ntBASIC6.01□□□□□ -1.45
VMP1Q96GC9 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 AC010325.3-201ENST00000641084 394 ntBASIC6.01□□□□□ -1.45
VMP1Q96GC9 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VMP1Q96GC9 AC010624.4-201ENST00000597606 1351 ntBASIC6.01□□□□□ -1.45
VMP1Q96GC9 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VMP1Q96GC9 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
VMP1Q96GC9 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VMP1Q96GC9 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VMP1Q96GC9 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VMP1Q96GC9 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VMP1Q96GC9 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.01□□□□□ -1.45
VMP1Q96GC9 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
VMP1Q96GC9 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6□□□□□ -1.45
VMP1Q96GC9 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VMP1Q96GC9 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VMP1Q96GC9 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6□□□□□ -1.45
VMP1Q96GC9 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6□□□□□ -1.45
VMP1Q96GC9 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6□□□□□ -1.45
VMP1Q96GC9 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6□□□□□ -1.45
VMP1Q96GC9 AC011815.2-201ENST00000618230 2021 ntBASIC6□□□□□ -1.45
VMP1Q96GC9 AC010132.2-201ENST00000295493 1043 ntBASIC6□□□□□ -1.45
VMP1Q96GC9 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6□□□□□ -1.45
VMP1Q96GC9 RNA5SP350-201ENST00000363298 111 ntBASIC6□□□□□ -1.45
VMP1Q96GC9 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6□□□□□ -1.45
VMP1Q96GC9 AL050335.1-201ENST00000396909 869 ntBASIC6□□□□□ -1.45
VMP1Q96GC9 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6□□□□□ -1.45
VMP1Q96GC9 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6□□□□□ -1.45
VMP1Q96GC9 AL359885.1-201ENST00000415786 903 ntBASIC6□□□□□ -1.45
VMP1Q96GC9 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6□□□□□ -1.45
VMP1Q96GC9 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6□□□□□ -1.45
VMP1Q96GC9 ARMC4P1-201ENST00000438905 707 ntBASIC6□□□□□ -1.45
VMP1Q96GC9 AC009237.1-201ENST00000442127 744 ntBASIC6□□□□□ -1.45
VMP1Q96GC9 COX4I1P2-201ENST00000447446 547 ntBASIC6□□□□□ -1.45
VMP1Q96GC9 AC097359.1-201ENST00000447946 463 ntBASIC6□□□□□ -1.45
VMP1Q96GC9 C1DP3-201ENST00000455013 423 ntBASIC6□□□□□ -1.45
VMP1Q96GC9 AL356390.1-201ENST00000455684 397 ntBASIC6□□□□□ -1.45
VMP1Q96GC9 HSPE1P22-201ENST00000456856 327 ntBASIC6□□□□□ -1.45
VMP1Q96GC9 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6□□□□□ -1.45
VMP1Q96GC9 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6□□□□□ -1.45
VMP1Q96GC9 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6□□□□□ -1.45
VMP1Q96GC9 AL117692.1-201ENST00000494283 713 ntBASIC6□□□□□ -1.45
VMP1Q96GC9 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6□□□□□ -1.45
VMP1Q96GC9 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6□□□□□ -1.45
VMP1Q96GC9 AC093816.1-201ENST00000515076 913 ntBASIC6□□□□□ -1.45
VMP1Q96GC9 RNA5SP418-201ENST00000515951 117 ntBASIC6□□□□□ -1.45
VMP1Q96GC9 OR4A41P-201ENST00000533053 928 ntBASIC6□□□□□ -1.45
VMP1Q96GC9 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6□□□□□ -1.45
VMP1Q96GC9 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6□□□□□ -1.45
VMP1Q96GC9 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6□□□□□ -1.45
VMP1Q96GC9 NPM1P45-201ENST00000583151 559 ntBASIC6□□□□□ -1.45
VMP1Q96GC9 AC006363.1-201ENST00000603806 463 ntBASIC6□□□□□ -1.45
VMP1Q96GC9 AC024589.2-201ENST00000605642 1294 ntBASIC6□□□□□ -1.45
VMP1Q96GC9 SNORA74.4-201ENST00000607595 199 ntBASIC6□□□□□ -1.45
VMP1Q96GC9 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6□□□□□ -1.45
VMP1Q96GC9 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6□□□□□ -1.45
VMP1Q96GC9 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
VMP1Q96GC9 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
VMP1Q96GC9 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
VMP1Q96GC9 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VMP1Q96GC9 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
VMP1Q96GC9 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6□□□□□ -1.45
VMP1Q96GC9 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VMP1Q96GC9 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
VMP1Q96GC9 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6□□□□□ -1.45
VMP1Q96GC9 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
VMP1Q96GC9 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
VMP1Q96GC9 RBPJP2-201ENST00000618187 1444 ntBASIC5.99□□□□□ -1.45
VMP1Q96GC9 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VMP1Q96GC9 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 AC005725.1-201ENST00000577346 2607 ntBASIC5.99□□□□□ -1.45
VMP1Q96GC9 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VMP1Q96GC9 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VMP1Q96GC9 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
VMP1Q96GC9 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VMP1Q96GC9 RNU6-386P-201ENST00000362650 107 ntBASIC5.99□□□□□ -1.45
VMP1Q96GC9 SNORD16-201ENST00000362803 99 ntBASIC5.99□□□□□ -1.45
VMP1Q96GC9 RN7SKP281-201ENST00000410472 352 ntBASIC5.99□□□□□ -1.45
VMP1Q96GC9 RNA5SP296-201ENST00000410523 111 ntBASIC5.99□□□□□ -1.45
VMP1Q96GC9 TRIM60P17-201ENST00000415181 719 ntBASIC5.99□□□□□ -1.45
VMP1Q96GC9 RPL21P50-201ENST00000417698 477 ntBASIC5.99□□□□□ -1.45
VMP1Q96GC9 AC002127.1-201ENST00000421305 225 ntBASIC5.99□□□□□ -1.45
VMP1Q96GC9 MED28P4-201ENST00000433137 572 ntBASIC5.99□□□□□ -1.45
VMP1Q96GC9 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.99□□□□□ -1.45
VMP1Q96GC9 EMC3-AS1-205ENST00000438698 534 ntBASIC5.99□□□□□ -1.45
VMP1Q96GC9 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms