Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC015911.5-201ENST00000587076 451 ntBASIC6.88□□□□□ -1.31
HPS3Q969F9 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.88□□□□□ -1.31
HPS3Q969F9 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
HPS3Q969F9 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HPS3Q969F9 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
HPS3Q969F9 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
HPS3Q969F9 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HPS3Q969F9 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
HPS3Q969F9 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.88□□□□□ -1.31
HPS3Q969F9 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HPS3Q969F9 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HPS3Q969F9 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HPS3Q969F9 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
HPS3Q969F9 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HPS3Q969F9 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
HPS3Q969F9 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
HPS3Q969F9 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HPS3Q969F9 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HPS3Q969F9 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
HPS3Q969F9 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.87□□□□□ -1.31
HPS3Q969F9 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HPS3Q969F9 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
HPS3Q969F9 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
HPS3Q969F9 RNA5SP110-201ENST00000362638 115 ntBASIC6.87□□□□□ -1.31
HPS3Q969F9 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HPS3Q969F9 SNORA70H-201ENST00000383910 135 ntBASIC6.87□□□□□ -1.31
HPS3Q969F9 SNORA70J-201ENST00000384182 135 ntBASIC6.87□□□□□ -1.31
HPS3Q969F9 MIR620-201ENST00000385232 95 ntBASIC6.87□□□□□ -1.31
HPS3Q969F9 AL360271.1-201ENST00000395679 510 ntBASIC6.87□□□□□ -1.31
HPS3Q969F9 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.87□□□□□ -1.31
HPS3Q969F9 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.87□□□□□ -1.31
HPS3Q969F9 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.87□□□□□ -1.31
HPS3Q969F9 Z99127.2-201ENST00000441426 334 ntBASIC6.87□□□□□ -1.31
HPS3Q969F9 MTND6P32-201ENST00000457611 483 ntBASIC6.87□□□□□ -1.31
HPS3Q969F9 AC078857.1-201ENST00000469870 667 ntBASIC6.87□□□□□ -1.31
HPS3Q969F9 RPL34P33-201ENST00000486062 334 ntBASIC6.87□□□□□ -1.31
HPS3Q969F9 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HPS3Q969F9 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.87□□□□□ -1.31
HPS3Q969F9 SNX18P24-201ENST00000505249 671 ntBASIC6.87□□□□□ -1.31
HPS3Q969F9 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HPS3Q969F9 HMGN1P17-201ENST00000513734 295 ntBASIC6.87□□□□□ -1.31
HPS3Q969F9 RN7SKP70-201ENST00000516655 271 ntBASIC6.87□□□□□ -1.31
HPS3Q969F9 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.87□□□□□ -1.31
HPS3Q969F9 RPA2P3-201ENST00000533268 770 ntBASIC6.87□□□□□ -1.31
HPS3Q969F9 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC6.87□□□□□ -1.31
HPS3Q969F9 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HPS3Q969F9 AC106785.3-201ENST00000564064 847 ntBASIC6.87□□□□□ -1.31
HPS3Q969F9 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.87□□□□□ -1.31
HPS3Q969F9 MTATP6P2-201ENST00000603319 678 ntBASIC6.87□□□□□ -1.31
HPS3Q969F9 uc_338.29-201ENST00000615099 168 ntBASIC6.87□□□□□ -1.31
HPS3Q969F9 AL137067.2-201ENST00000621202 131 ntBASIC6.87□□□□□ -1.31
HPS3Q969F9 AC010872.1-201ENST00000624225 675 ntBASIC6.87□□□□□ -1.31
HPS3Q969F9 AL162377.2-201ENST00000624532 337 ntBASIC6.87□□□□□ -1.31
HPS3Q969F9 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HPS3Q969F9 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
HPS3Q969F9 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
HPS3Q969F9 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
HPS3Q969F9 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HPS3Q969F9 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
HPS3Q969F9 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.87□□□□□ -1.31
HPS3Q969F9 AL078595.2-201ENST00000605309 1780 ntBASIC6.87□□□□□ -1.31
HPS3Q969F9 AC140479.2-201ENST00000421567 3130 ntBASIC6.87□□□□□ -1.31
HPS3Q969F9 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HPS3Q969F9 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
HPS3Q969F9 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
HPS3Q969F9 SHQ1P1-201ENST00000437111 1544 ntBASIC6.86□□□□□ -1.31
HPS3Q969F9 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HPS3Q969F9 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.86□□□□□ -1.31
HPS3Q969F9 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HPS3Q969F9 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.86□□□□□ -1.31
HPS3Q969F9 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.86□□□□□ -1.31
HPS3Q969F9 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
HPS3Q969F9 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
HPS3Q969F9 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HPS3Q969F9 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.86□□□□□ -1.31
HPS3Q969F9 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.86□□□□□ -1.31
HPS3Q969F9 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.86□□□□□ -1.31
HPS3Q969F9 AL354707.3-201ENST00000427308 331 ntBASIC6.86□□□□□ -1.31
HPS3Q969F9 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.86□□□□□ -1.31
HPS3Q969F9 PPIAP10-201ENST00000438675 458 ntBASIC6.86□□□□□ -1.31
HPS3Q969F9 OR13K1P-201ENST00000444577 975 ntBASIC6.86□□□□□ -1.31
HPS3Q969F9 POU5F1P5-201ENST00000445059 658 ntBASIC6.86□□□□□ -1.31
HPS3Q969F9 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.86□□□□□ -1.31
HPS3Q969F9 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.86□□□□□ -1.31
HPS3Q969F9 MTND5P21-201ENST00000531961 522 ntBASIC6.86□□□□□ -1.31
HPS3Q969F9 AC036111.2-201ENST00000533247 901 ntBASIC6.86□□□□□ -1.31
HPS3Q969F9 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HPS3Q969F9 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.86□□□□□ -1.31
HPS3Q969F9 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.86□□□□□ -1.31
HPS3Q969F9 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.86□□□□□ -1.31
HPS3Q969F9 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.86□□□□□ -1.31
HPS3Q969F9 AC027216.1-201ENST00000577726 685 ntBASIC6.86□□□□□ -1.31
HPS3Q969F9 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
HPS3Q969F9 AC020916.2-201ENST00000591242 360 ntBASIC6.86□□□□□ -1.31
HPS3Q969F9 AL096803.3-201ENST00000609032 532 ntBASIC6.86□□□□□ -1.31
HPS3Q969F9 CR589904.2-201ENST00000612533 440 ntBASIC6.86□□□□□ -1.31
HPS3Q969F9 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.86□□□□□ -1.31
HPS3Q969F9 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.86□□□□□ -1.31
HPS3Q969F9 MAPK10-350ENST00000641777 965 ntBASIC6.86□□□□□ -1.31
HPS3Q969F9 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms