Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SNED1Q8TER0 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SNED1Q8TER0 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
SNED1Q8TER0 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SNED1Q8TER0 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC7.05□□□□□ -1.28
SNED1Q8TER0 GAPDHP42-201ENST00000406848 981 ntBASIC7.05□□□□□ -1.28
SNED1Q8TER0 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC7.05□□□□□ -1.28
SNED1Q8TER0 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.05□□□□□ -1.28
SNED1Q8TER0 SLC35E1P1-201ENST00000419313 864 ntBASIC7.05□□□□□ -1.28
SNED1Q8TER0 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC7.05□□□□□ -1.28
SNED1Q8TER0 RPL7AP6-201ENST00000477943 801 ntBASIC7.05□□□□□ -1.28
SNED1Q8TER0 RPL23AP40-201ENST00000487630 390 ntBASIC7.05□□□□□ -1.28
SNED1Q8TER0 AC072052.1-201ENST00000496556 306 ntBASIC7.05□□□□□ -1.28
SNED1Q8TER0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC7.05□□□□□ -1.28
SNED1Q8TER0 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC7.05□□□□□ -1.28
SNED1Q8TER0 CDH12P4-201ENST00000517835 295 ntBASIC7.05□□□□□ -1.28
SNED1Q8TER0 AC021678.3-201ENST00000517893 476 ntBASIC7.05□□□□□ -1.28
SNED1Q8TER0 CDH12P3-201ENST00000517935 295 ntBASIC7.05□□□□□ -1.28
SNED1Q8TER0 CDH12P1-201ENST00000518435 295 ntBASIC7.05□□□□□ -1.28
SNED1Q8TER0 ASB8-202ENST00000535055 657 ntTSL 2 BASIC7.05□□□□□ -1.28
SNED1Q8TER0 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
SNED1Q8TER0 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
SNED1Q8TER0 MIR4260-201ENST00000583107 67 ntBASIC7.05□□□□□ -1.28
SNED1Q8TER0 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC7.05□□□□□ -1.28
SNED1Q8TER0 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC7.05□□□□□ -1.28
SNED1Q8TER0 AP001885.1-201ENST00000621658 558 ntBASIC7.05□□□□□ -1.28
SNED1Q8TER0 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.05□□□□□ -1.28
SNED1Q8TER0 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SNED1Q8TER0 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SNED1Q8TER0 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SNED1Q8TER0 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SNED1Q8TER0 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
SNED1Q8TER0 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.05□□□□□ -1.28
SNED1Q8TER0 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SNED1Q8TER0 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
SNED1Q8TER0 AL161912.4-201ENST00000623889 2468 ntBASIC7.05□□□□□ -1.28
SNED1Q8TER0 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
SNED1Q8TER0 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
SNED1Q8TER0 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
SNED1Q8TER0 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
SNED1Q8TER0 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
SNED1Q8TER0 AC013268.3-201ENST00000262716 2324 ntBASIC7.05□□□□□ -1.28
SNED1Q8TER0 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
SNED1Q8TER0 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC7.04□□□□□ -1.28
SNED1Q8TER0 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC7.04□□□□□ -1.28
SNED1Q8TER0 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
SNED1Q8TER0 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SNED1Q8TER0 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.04□□□□□ -1.28
SNED1Q8TER0 AL590762.4-201ENST00000425885 253 ntBASIC7.04□□□□□ -1.28
SNED1Q8TER0 FABP7P2-201ENST00000429946 379 ntBASIC7.04□□□□□ -1.28
SNED1Q8TER0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC7.04□□□□□ -1.28
SNED1Q8TER0 AC079922.1-201ENST00000443291 359 ntBASIC7.04□□□□□ -1.28
SNED1Q8TER0 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.04□□□□□ -1.28
SNED1Q8TER0 AC090638.1-201ENST00000498296 909 ntBASIC7.04□□□□□ -1.28
SNED1Q8TER0 CCDC11P1-201ENST00000503137 1162 ntBASIC7.04□□□□□ -1.28
SNED1Q8TER0 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC7.04□□□□□ -1.28
SNED1Q8TER0 RBM22P12-201ENST00000567098 1255 ntBASIC7.04□□□□□ -1.28
SNED1Q8TER0 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.04□□□□□ -1.28
SNED1Q8TER0 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SNED1Q8TER0 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
SNED1Q8TER0 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.04□□□□□ -1.28
SNED1Q8TER0 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SNED1Q8TER0 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.04□□□□□ -1.28
SNED1Q8TER0 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC7.04□□□□□ -1.28
SNED1Q8TER0 USP9YP3-201ENST00000434481 1766 ntBASIC7.04□□□□□ -1.28
SNED1Q8TER0 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
SNED1Q8TER0 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.03□□□□□ -1.28
SNED1Q8TER0 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC7.03□□□□□ -1.28
SNED1Q8TER0 AL121768.1-201ENST00000613917 2544 ntBASIC7.03□□□□□ -1.28
SNED1Q8TER0 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SNED1Q8TER0 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SNED1Q8TER0 FBXL21-201ENST00000297158 1305 ntBASIC7.03□□□□□ -1.28
SNED1Q8TER0 AC092724.1-201ENST00000624623 3397 ntBASIC7.03□□□□□ -1.28
SNED1Q8TER0 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNED1Q8TER0 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.03□□□□□ -1.28
SNED1Q8TER0 AL139805.2-201ENST00000455305 2433 ntBASIC7.03□□□□□ -1.28
SNED1Q8TER0 SNORA56-201ENST00000383966 129 ntBASIC7.03□□□□□ -1.28
SNED1Q8TER0 MIR223-201ENST00000385204 110 ntBASIC7.03□□□□□ -1.28
SNED1Q8TER0 MIR550A3-201ENST00000390735 95 ntBASIC7.03□□□□□ -1.28
SNED1Q8TER0 RNA5SP339-201ENST00000390987 122 ntBASIC7.03□□□□□ -1.28
SNED1Q8TER0 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNED1Q8TER0 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.03□□□□□ -1.28
SNED1Q8TER0 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC7.03□□□□□ -1.28
SNED1Q8TER0 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC7.03□□□□□ -1.28
SNED1Q8TER0 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC7.03□□□□□ -1.28
SNED1Q8TER0 AL450996.1-201ENST00000445574 1202 ntBASIC7.03□□□□□ -1.28
SNED1Q8TER0 AC087672.1-201ENST00000479876 766 ntBASIC7.03□□□□□ -1.28
SNED1Q8TER0 AC099521.1-201ENST00000482557 334 ntBASIC7.03□□□□□ -1.28
SNED1Q8TER0 RN7SL570P-201ENST00000484405 292 ntBASIC7.03□□□□□ -1.28
SNED1Q8TER0 AL035690.1-201ENST00000490892 383 ntBASIC7.03□□□□□ -1.28
SNED1Q8TER0 AC023818.1-201ENST00000498379 384 ntBASIC7.03□□□□□ -1.28
SNED1Q8TER0 AC105420.1-201ENST00000504389 582 ntBASIC7.03□□□□□ -1.28
SNED1Q8TER0 RPEP1-201ENST00000504507 658 ntBASIC7.03□□□□□ -1.28
SNED1Q8TER0 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SNED1Q8TER0 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC7.03□□□□□ -1.28
SNED1Q8TER0 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.03□□□□□ -1.28
SNED1Q8TER0 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC7.03□□□□□ -1.28
SNED1Q8TER0 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.03□□□□□ -1.28
SNED1Q8TER0 AL683813.2-201ENST00000605245 502 ntBASIC7.03□□□□□ -1.28
SNED1Q8TER0 AL118522.2-201ENST00000616045 615 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms