Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 GSTA12P-201ENST00000402398 508 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 SPATA20P1-201ENST00000423089 438 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AC115285.1-201ENST00000424879 736 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 MTCO2P23-201ENST00000425216 680 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 GTF3AP6-201ENST00000432585 986 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 GAPDHP20-201ENST00000444107 1007 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 DUXAP8-207ENST00000456786 622 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AC004890.1-201ENST00000461005 181 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AC099340.1-201ENST00000475247 599 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AC022415.1-202ENST00000486612 523 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AC010627.1-201ENST00000503819 1294 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 RN7SKP287-201ENST00000516546 266 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AC067904.2-201ENST00000517322 1283 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 YWHAZP1-201ENST00000556286 722 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 RN7SL199P-201ENST00000578752 281 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 RN7SL656P-201ENST00000579044 281 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 RN7SL404P-201ENST00000582421 281 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 MIR4271-201ENST00000582451 67 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AP002884.5-201ENST00000595053 1132 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AC245052.7-201ENST00000601161 359 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 FAM72A-208ENST00000607379 1139 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 BX323046.1-201ENST00000610145 535 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 DUXAP10-204ENST00000612052 616 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AL445647.2-201ENST00000615170 130 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AC018692.2-201ENST00000624130 348 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 RNA5SP308-201ENST00000362532 115 ntBASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 RNA5SP321-201ENST00000362722 111 ntBASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 FDPSP5-201ENST00000399474 1057 ntBASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 MIR1266-201ENST00000408125 84 ntBASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 AL627224.1-201ENST00000448334 444 ntBASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 RN7SKP198-201ENST00000459286 306 ntBASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 AC117395.1-201ENST00000487390 403 ntBASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 MTCO3P28-201ENST00000513351 515 ntBASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 RN7SKP196-201ENST00000516267 345 ntBASIC6.19□□□□□ -1.42
SIMC1Q8NDZ2 IGHV3-57-201ENST00000520143 280 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms