Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 RPL7P45-201ENST00000455851 743 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 ATG12P2-201ENST00000456830 416 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC092691.2-201ENST00000461787 803 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AP003385.3-201ENST00000472498 287 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 RAP1BP2-201ENST00000478270 544 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 SUMO1P1-201ENST00000497904 306 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC021220.1-201ENST00000507445 630 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC096754.1-201ENST00000508904 818 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC095052.1-201ENST00000509955 863 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 LRRC6P1-201ENST00000532188 885 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC140063.1-201ENST00000541343 259 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 LYZ-203ENST00000549690 669 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC106734.1-201ENST00000568646 663 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AL035410.2-201ENST00000604963 864 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 HTR1DP1-201ENST00000616500 888 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AL133370.2-201ENST00000619934 439 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC096708.4-201ENST00000620563 552 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC006328.2-201ENST00000623198 397 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC012005.2-201ENST00000624333 397 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 OLMALINC-203ENST00000641087 3779 ntBASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
TRIM48Q8IWZ4 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 MTND4P4-201ENST00000439033 1366 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AC010132.4-201ENST00000569883 1368 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 ZNF658B-201ENST00000602828 3408 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 MIR199B-201ENST00000384849 110 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AC026310.1-201ENST00000396004 378 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 GSTA12P-201ENST00000402398 508 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AL365396.1-201ENST00000430854 671 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 MTCO3P5-201ENST00000433620 714 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AC069540.1-201ENST00000446320 988 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 MTCO2P7-201ENST00000446518 666 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 MTND2P28-201ENST00000457540 1044 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 RPL6P9-201ENST00000466502 859 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AC126121.1-201ENST00000482313 553 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 RPL7AP23-201ENST00000482625 776 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AC091849.1-201ENST00000509920 121 ntBASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC6.61□□□□□ -1.35
TRIM48Q8IWZ4 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 281.1 ms