Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 CDY7P-201ENST00000429883 1604 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 NEK2P4-201ENST00000425793 1329 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 ARMCX7P-201ENST00000372828 562 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 SNORA75-201ENST00000384158 137 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 RNU6-692P-201ENST00000384496 107 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 ATF1P1-201ENST00000406040 927 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 RPS7P9-201ENST00000414704 586 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AL645936.2-201ENST00000430565 928 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 NIP7P1-201ENST00000433227 512 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 Z99127.2-201ENST00000441426 334 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 MTND5P14-201ENST00000441481 1267 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC079781.1-201ENST00000441505 394 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 COX6CP2-201ENST00000444980 225 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 GTF2F2P2-201ENST00000445825 721 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 DEFA11P-201ENST00000446470 261 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 NDUFB4P1-201ENST00000462398 381 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC008620.1-201ENST00000468453 592 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 ALG13-211ENST00000473389 693 ntTSL 2 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC004924.1-201ENST00000480160 781 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC008628.2-201ENST00000502605 298 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC108941.1-201ENST00000502853 530 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC010409.2-201ENST00000505780 478 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 MTATP6P22-201ENST00000507369 598 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC006499.4-201ENST00000510947 694 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 HMGB3P13-201ENST00000511263 607 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC133963.2-201ENST00000513686 578 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 NATP-201ENST00000523491 878 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC005000.1-201ENST00000536192 288 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AL121839.1-201ENST00000556233 1185 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 EIF5A2P1-201ENST00000564027 460 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 RN7SL657P-201ENST00000582431 293 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 MIR4999-201ENST00000585029 91 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 EXOSC3P2-201ENST00000594464 497 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AL589765.5-201ENST00000596133 515 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC083899.3-201ENST00000603413 594 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AP001554.1-201ENST00000604533 376 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 FER-210ENST00000628534 558 ntTSL 5 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 AC061975.5-201ENST00000584928 1441 ntBASIC6.58□□□□□ -1.36
ATG4DQ86TL0 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4DQ86TL0 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4DQ86TL0 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms