Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC092902.1-201ENST00000486999 259 ntBASIC5.38□□□□□ -1.55
EFNB3Q15768 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.38□□□□□ -1.55
EFNB3Q15768 MTND6P8-201ENST00000503471 522 ntBASIC5.38□□□□□ -1.55
EFNB3Q15768 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
EFNB3Q15768 AC119751.4-201ENST00000507498 357 ntBASIC5.38□□□□□ -1.55
EFNB3Q15768 AC010468.3-201ENST00000508225 458 ntBASIC5.38□□□□□ -1.55
EFNB3Q15768 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.38□□□□□ -1.55
EFNB3Q15768 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.38□□□□□ -1.55
EFNB3Q15768 PRMT5P1-201ENST00000514351 598 ntBASIC5.38□□□□□ -1.55
EFNB3Q15768 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.38□□□□□ -1.55
EFNB3Q15768 AC005363.1-201ENST00000530779 351 ntBASIC5.38□□□□□ -1.55
EFNB3Q15768 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.38□□□□□ -1.55
EFNB3Q15768 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
EFNB3Q15768 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.38□□□□□ -1.55
EFNB3Q15768 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.38□□□□□ -1.55
EFNB3Q15768 AC009120.3-201ENST00000563335 499 ntBASIC5.38□□□□□ -1.55
EFNB3Q15768 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.38□□□□□ -1.55
EFNB3Q15768 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
EFNB3Q15768 AP001496.3-201ENST00000580230 913 ntBASIC5.38□□□□□ -1.55
EFNB3Q15768 AP005136.2-201ENST00000583253 1049 ntBASIC5.38□□□□□ -1.55
EFNB3Q15768 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.38□□□□□ -1.55
EFNB3Q15768 AP001823.1-201ENST00000604056 1003 ntBASIC5.38□□□□□ -1.55
EFNB3Q15768 AC091193.1-201ENST00000604640 448 ntBASIC5.38□□□□□ -1.55
EFNB3Q15768 AL450270.1-201ENST00000606160 391 ntBASIC5.38□□□□□ -1.55
EFNB3Q15768 AL008723.3-201ENST00000608926 449 ntBASIC5.38□□□□□ -1.55
EFNB3Q15768 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
EFNB3Q15768 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.38□□□□□ -1.55
EFNB3Q15768 MIR6778-201ENST00000617912 73 ntBASIC5.38□□□□□ -1.55
EFNB3Q15768 FAM27E2-201ENST00000619668 403 ntBASIC5.38□□□□□ -1.55
EFNB3Q15768 AP001885.1-201ENST00000621658 558 ntBASIC5.38□□□□□ -1.55
EFNB3Q15768 AC025262.3-201ENST00000623666 360 ntBASIC5.38□□□□□ -1.55
EFNB3Q15768 AC079298.2-201ENST00000623885 459 ntBASIC5.38□□□□□ -1.55
EFNB3Q15768 MIR1910-201ENST00000636955 80 ntBASIC5.38□□□□□ -1.55
EFNB3Q15768 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
EFNB3Q15768 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
EFNB3Q15768 DOCK11P1-201ENST00000553480 5932 ntBASIC5.38□□□□□ -1.55
EFNB3Q15768 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
EFNB3Q15768 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.38□□□□□ -1.55
EFNB3Q15768 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
EFNB3Q15768 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
EFNB3Q15768 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
EFNB3Q15768 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
EFNB3Q15768 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.38□□□□□ -1.55
EFNB3Q15768 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
EFNB3Q15768 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
EFNB3Q15768 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
EFNB3Q15768 AC119674.1-202ENST00000641333 1860 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.37□□□□□ -1.55
EFNB3Q15768 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
EFNB3Q15768 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
EFNB3Q15768 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.37□□□□□ -1.55
EFNB3Q15768 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
EFNB3Q15768 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
EFNB3Q15768 MTND4LP17-201ENST00000414607 293 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.37□□□□□ -1.55
EFNB3Q15768 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.37□□□□□ -1.55
EFNB3Q15768 PNKDP1-201ENST00000435914 430 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.37□□□□□ -1.55
EFNB3Q15768 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.37□□□□□ -1.55
EFNB3Q15768 Z99127.2-201ENST00000441426 334 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 RNF2P1-201ENST00000442955 1010 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 RPL6P30-201ENST00000443382 862 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.37□□□□□ -1.55
EFNB3Q15768 AL161722.1-201ENST00000446972 1032 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 HIGD1AP16-201ENST00000450986 258 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 MTND6P32-201ENST00000457611 483 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 AC108751.3-201ENST00000461814 1020 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 PPP1R11P1-201ENST00000486095 376 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 RPL17P2-201ENST00000491913 451 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.37□□□□□ -1.55
EFNB3Q15768 AC090958.1-201ENST00000511122 351 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 VTA1P2-201ENST00000520205 911 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.37□□□□□ -1.55
EFNB3Q15768 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.37□□□□□ -1.55
EFNB3Q15768 IGHV1-14-201ENST00000523391 241 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 AC113192.3-201ENST00000529152 742 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
EFNB3Q15768 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.37□□□□□ -1.55
EFNB3Q15768 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.37□□□□□ -1.55
EFNB3Q15768 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.37□□□□□ -1.55
EFNB3Q15768 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.37□□□□□ -1.55
EFNB3Q15768 AC090888.3-201ENST00000558917 509 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 AC092868.3-201ENST00000560515 784 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 AC106785.3-201ENST00000564064 847 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 AC233702.7-202ENST00000582941 211 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.37□□□□□ -1.55
EFNB3Q15768 AC015911.5-201ENST00000587076 451 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.37□□□□□ -1.55
EFNB3Q15768 AC011497.2-201ENST00000600255 639 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.37□□□□□ -1.55
EFNB3Q15768 AL049777.1-201ENST00000622740 518 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 AC012254.5-201ENST00000623573 478 ntBASIC5.37□□□□□ -1.55
EFNB3Q15768 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.37□□□□□ -1.55
EFNB3Q15768 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
EFNB3Q15768 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
EFNB3Q15768 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
EFNB3Q15768 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
EFNB3Q15768 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
EFNB3Q15768 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms