Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXF1Q12946 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
FOXF1Q12946 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXF1Q12946 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXF1Q12946 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXF1Q12946 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXF1Q12946 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
FOXF1Q12946 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXF1Q12946 FBXL21-201ENST00000297158 1305 ntBASIC5.31□□□□□ -1.56
FOXF1Q12946 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
FOXF1Q12946 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXF1Q12946 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
FOXF1Q12946 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXF1Q12946 GNG5P2-201ENST00000372054 207 ntBASIC5.31□□□□□ -1.56
FOXF1Q12946 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXF1Q12946 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXF1Q12946 AC126120.1-201ENST00000431082 470 ntBASIC5.31□□□□□ -1.56
FOXF1Q12946 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXF1Q12946 AC073410.1-201ENST00000435125 589 ntBASIC5.31□□□□□ -1.56
FOXF1Q12946 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
FOXF1Q12946 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXF1Q12946 AC023141.8-201ENST00000442554 208 ntBASIC5.31□□□□□ -1.56
FOXF1Q12946 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXF1Q12946 OSTCP1-201ENST00000455507 450 ntBASIC5.31□□□□□ -1.56
FOXF1Q12946 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXF1Q12946 AC004129.2-201ENST00000457229 287 ntBASIC5.31□□□□□ -1.56
FOXF1Q12946 AC079080.1-201ENST00000479841 822 ntBASIC5.31□□□□□ -1.56
FOXF1Q12946 GAPDHP71-201ENST00000511530 1003 ntBASIC5.31□□□□□ -1.56
FOXF1Q12946 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXF1Q12946 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXF1Q12946 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.31□□□□□ -1.56
FOXF1Q12946 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXF1Q12946 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXF1Q12946 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.31□□□□□ -1.56
FOXF1Q12946 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXF1Q12946 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXF1Q12946 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXF1Q12946 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXF1Q12946 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXF1Q12946 AC005726.4-201ENST00000582858 458 ntBASIC5.31□□□□□ -1.56
FOXF1Q12946 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXF1Q12946 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXF1Q12946 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXF1Q12946 FAM27E4-201ENST00000605259 342 ntBASIC5.31□□□□□ -1.56
FOXF1Q12946 AC145423.1-201ENST00000605712 336 ntBASIC5.31□□□□□ -1.56
FOXF1Q12946 AL359742.1-201ENST00000622497 540 ntBASIC5.31□□□□□ -1.56
FOXF1Q12946 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.31□□□□□ -1.56
FOXF1Q12946 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.31□□□□□ -1.56
FOXF1Q12946 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
FOXF1Q12946 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
FOXF1Q12946 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
FOXF1Q12946 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
FOXF1Q12946 WDR95P-201ENST00000425638 1542 ntBASIC5.31□□□□□ -1.56
FOXF1Q12946 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
FOXF1Q12946 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
FOXF1Q12946 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXF1Q12946 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.31□□□□□ -1.56
FOXF1Q12946 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
FOXF1Q12946 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
FOXF1Q12946 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXF1Q12946 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXF1Q12946 PDZK1P1-202ENST00000425209 1350 ntBASIC5.3□□□□□ -1.56
FOXF1Q12946 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FOXF1Q12946 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXF1Q12946 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXF1Q12946 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
FOXF1Q12946 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.3□□□□□ -1.56
FOXF1Q12946 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXF1Q12946 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.3□□□□□ -1.56
FOXF1Q12946 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXF1Q12946 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
FOXF1Q12946 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXF1Q12946 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
FOXF1Q12946 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.3□□□□□ -1.56
FOXF1Q12946 RNU1-150P-201ENST00000362491 162 ntBASIC5.3□□□□□ -1.56
FOXF1Q12946 MIR1203-201ENST00000408812 85 ntBASIC5.3□□□□□ -1.56
FOXF1Q12946 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.3□□□□□ -1.56
FOXF1Q12946 DEFA9P-201ENST00000433042 285 ntBASIC5.3□□□□□ -1.56
FOXF1Q12946 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXF1Q12946 NDUFA5P5-201ENST00000468361 342 ntBASIC5.3□□□□□ -1.56
FOXF1Q12946 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.3□□□□□ -1.56
FOXF1Q12946 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.3□□□□□ -1.56
FOXF1Q12946 IGLV3-30-201ENST00000524362 298 ntBASIC5.3□□□□□ -1.56
FOXF1Q12946 AC091078.2-201ENST00000557145 559 ntBASIC5.3□□□□□ -1.56
FOXF1Q12946 AL356801.1-201ENST00000559320 294 ntBASIC5.3□□□□□ -1.56
FOXF1Q12946 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXF1Q12946 AC092121.1-201ENST00000569452 202 ntBASIC5.3□□□□□ -1.56
FOXF1Q12946 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXF1Q12946 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXF1Q12946 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.3□□□□□ -1.56
FOXF1Q12946 AL096712.1-201ENST00000614561 159 ntBASIC5.3□□□□□ -1.56
FOXF1Q12946 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXF1Q12946 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXF1Q12946 AC078880.4-201ENST00000617627 1749 ntBASIC5.3□□□□□ -1.56
FOXF1Q12946 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXF1Q12946 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
FOXF1Q12946 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
FOXF1Q12946 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.3□□□□□ -1.56
FOXF1Q12946 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.3□□□□□ -1.56
FOXF1Q12946 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms