Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.47□□□□□ -1.53
SCN1BQ07699 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.47□□□□□ -1.53
SCN1BQ07699 MIR4675-201ENST00000577898 77 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 MIR132-201ENST00000591554 101 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.47□□□□□ -1.53
SCN1BQ07699 BMS1P7-201ENST00000602440 1052 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 BX322635.1-201ENST00000605804 496 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 AL137000.1-201ENST00000610528 1244 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 AC020763.5-201ENST00000623298 430 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.47□□□□□ -1.53
SCN1BQ07699 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.47□□□□□ -1.53
SCN1BQ07699 AL139254.3-201ENST00000641097 674 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 AC119674.1-220ENST00000641502 1048 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SCN1BQ07699 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
SCN1BQ07699 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SCN1BQ07699 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCN1BQ07699 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SCN1BQ07699 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.47□□□□□ -1.53
SCN1BQ07699 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCN1BQ07699 AC005005.4-201ENST00000623789 16698 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCN1BQ07699 AP005432.1-201ENST00000580891 3485 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 RBPJP6-201ENST00000411556 1431 ntBASIC5.47□□□□□ -1.53
SCN1BQ07699 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.47□□□□□ -1.53
SCN1BQ07699 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SCN1BQ07699 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.47□□□□□ -1.53
SCN1BQ07699 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
SCN1BQ07699 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.47□□□□□ -1.53
SCN1BQ07699 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SCN1BQ07699 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SCN1BQ07699 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
SCN1BQ07699 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SCN1BQ07699 CASC19-281ENST00000642118 1554 ntBASIC5.46□□□□□ -1.53
SCN1BQ07699 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.53
SCN1BQ07699 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.53
SCN1BQ07699 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
SCN1BQ07699 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SCN1BQ07699 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SCN1BQ07699 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SCN1BQ07699 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SCN1BQ07699 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SCN1BQ07699 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SCN1BQ07699 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
SCN1BQ07699 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.46□□□□□ -1.54
SCN1BQ07699 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SCN1BQ07699 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SCN1BQ07699 AL034546.1-201ENST00000623740 3693 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 PPIAP24-201ENST00000328558 471 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SCN1BQ07699 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SCN1BQ07699 AC245036.1-201ENST00000391727 309 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 HMGB3P7-201ENST00000400214 611 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.46□□□□□ -1.54
SCN1BQ07699 NFU1P1-201ENST00000413128 774 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.46□□□□□ -1.54
SCN1BQ07699 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.46□□□□□ -1.54
SCN1BQ07699 RPL23AP85-201ENST00000421838 433 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 RNF19BPX-201ENST00000426224 625 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 VN1R53P-201ENST00000429536 957 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.46□□□□□ -1.54
SCN1BQ07699 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.46□□□□□ -1.54
SCN1BQ07699 AL845321.1-201ENST00000444603 348 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.46□□□□□ -1.54
SCN1BQ07699 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.46□□□□□ -1.54
SCN1BQ07699 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.46□□□□□ -1.54
SCN1BQ07699 AC022080.2-201ENST00000452932 533 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 AL133480.2-201ENST00000456723 487 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.46□□□□□ -1.54
SCN1BQ07699 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.46□□□□□ -1.54
SCN1BQ07699 SNORA70.11-201ENST00000515987 138 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 SNORA70.13-201ENST00000516116 138 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 snoU109.5-201ENST00000516231 132 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
SCN1BQ07699 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.46□□□□□ -1.54
SCN1BQ07699 AC130366.1-201ENST00000526505 1192 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.46□□□□□ -1.54
SCN1BQ07699 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.46□□□□□ -1.54
SCN1BQ07699 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.46□□□□□ -1.54
SCN1BQ07699 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.46□□□□□ -1.54
SCN1BQ07699 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.46□□□□□ -1.54
SCN1BQ07699 AL049779.3-201ENST00000557141 606 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.46□□□□□ -1.54
SCN1BQ07699 AC019322.1-201ENST00000571869 389 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.46□□□□□ -1.54
SCN1BQ07699 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.46□□□□□ -1.54
SCN1BQ07699 AC012175.1-201ENST00000603755 531 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 RPS4XP21-201ENST00000603814 750 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 AC019131.2-201ENST00000609071 870 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 AL356274.1-201ENST00000617064 410 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.46□□□□□ -1.54
SCN1BQ07699 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.46□□□□□ -1.54
SCN1BQ07699 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.46□□□□□ -1.54
SCN1BQ07699 OR51C1P-202ENST00000641159 1444 ntBASIC5.46□□□□□ -1.54
SCN1BQ07699 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SCN1BQ07699 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SCN1BQ07699 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SCN1BQ07699 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms