Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.36□□□□□ -1.23
SOX4Q06945 AC004520.1-201ENST00000608362 1413 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 MTND4P29-201ENST00000503122 1372 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
SOX4Q06945 MTND4P31-201ENST00000425607 1343 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX4Q06945 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX4Q06945 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX4Q06945 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX4Q06945 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SOX4Q06945 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX4Q06945 UBE2Q2P1-202ENST00000354771 883 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 U6.112-201ENST00000384129 70 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 RNU6-1005P-201ENST00000384519 107 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 FDPSP5-201ENST00000399474 1057 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 RSL24D1P4-201ENST00000400938 484 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 RPL12P23-201ENST00000405880 490 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC7.36□□□□□ -1.23
SOX4Q06945 CYP4F32P-201ENST00000426492 504 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC7.36□□□□□ -1.23
SOX4Q06945 OR2B8P-201ENST00000432841 938 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 Z74696.2-201ENST00000436514 498 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 RPEP4-201ENST00000437636 602 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.36□□□□□ -1.23
SOX4Q06945 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.36□□□□□ -1.23
SOX4Q06945 RPL6P30-201ENST00000443382 862 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.36□□□□□ -1.23
SOX4Q06945 AC023245.1-201ENST00000468501 517 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 RN7SL37P-201ENST00000490461 307 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 AC114324.2-202ENST00000503812 134 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC7.36□□□□□ -1.23
SOX4Q06945 AC109464.2-201ENST00000510242 943 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 AC008837.1-201ENST00000511513 412 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC7.36□□□□□ -1.23
SOX4Q06945 OR9L1P-201ENST00000529493 933 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
SOX4Q06945 AP006587.5-201ENST00000532033 739 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 BTG1P1-201ENST00000540396 508 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
SOX4Q06945 AL121766.1-201ENST00000547436 487 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC7.36□□□□□ -1.23
SOX4Q06945 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC7.36□□□□□ -1.23
SOX4Q06945 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SOX4Q06945 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC7.36□□□□□ -1.23
SOX4Q06945 AC027104.1-201ENST00000563702 681 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 MIR4789-201ENST00000577469 82 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.36□□□□□ -1.23
SOX4Q06945 RPL29P33-201ENST00000587474 316 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC7.36□□□□□ -1.23
SOX4Q06945 AP001269.3-201ENST00000588718 329 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC7.36□□□□□ -1.23
SOX4Q06945 VN1R90P-201ENST00000595717 726 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 AF131215.7-201ENST00000602443 707 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 AL356055.1-201ENST00000602528 446 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.36□□□□□ -1.23
SOX4Q06945 AC111186.1-201ENST00000604684 130 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 RMST_10.1-201ENST00000616309 154 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX4Q06945 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.36□□□□□ -1.23
SOX4Q06945 CLUHP10-201ENST00000631979 980 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX4Q06945 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
SOX4Q06945 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SOX4Q06945 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SOX4Q06945 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SOX4Q06945 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX4Q06945 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.36□□□□□ -1.23
SOX4Q06945 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
SOX4Q06945 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX4Q06945 MKI67P1-201ENST00000604297 1460 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SOX4Q06945 ZNF806-201ENST00000438300 1774 ntBASIC7.36□□□□□ -1.23
SOX4Q06945 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SOX4Q06945 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SOX4Q06945 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SOX4Q06945 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.35□□□□□ -1.23
SOX4Q06945 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
SOX4Q06945 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.35□□□□□ -1.23
SOX4Q06945 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.35□□□□□ -1.23
SOX4Q06945 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SOX4Q06945 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.35□□□□□ -1.23
SOX4Q06945 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
SOX4Q06945 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SOX4Q06945 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SOX4Q06945 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.35□□□□□ -1.23
SOX4Q06945 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SOX4Q06945 SGO1P2-201ENST00000429458 1589 ntBASIC7.35□□□□□ -1.23
SOX4Q06945 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SOX4Q06945 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
SOX4Q06945 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SOX4Q06945 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SOX4Q06945 SNORD94-201ENST00000386037 137 ntBASIC7.35□□□□□ -1.23
SOX4Q06945 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
SOX4Q06945 AC019178.1-201ENST00000392337 440 ntBASIC7.35□□□□□ -1.23
SOX4Q06945 ATF1P1-201ENST00000406040 927 ntBASIC7.35□□□□□ -1.23
SOX4Q06945 Z82198.3-201ENST00000421145 199 ntBASIC7.35□□□□□ -1.23
SOX4Q06945 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC7.35□□□□□ -1.23
SOX4Q06945 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC7.35□□□□□ -1.23
SOX4Q06945 COX7BP2-201ENST00000437976 242 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms