Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.51□□□□□ -1.37
TPM4P67936 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.51□□□□□ -1.37
TPM4P67936 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.51□□□□□ -1.37
TPM4P67936 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.51□□□□□ -1.37
TPM4P67936 AC138832.1-201ENST00000522871 556 ntBASIC6.51□□□□□ -1.37
TPM4P67936 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.51□□□□□ -1.37
TPM4P67936 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TPM4P67936 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.51□□□□□ -1.37
TPM4P67936 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC6.51□□□□□ -1.37
TPM4P67936 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.51□□□□□ -1.37
TPM4P67936 AC027796.1-201ENST00000575593 512 ntBASIC6.51□□□□□ -1.37
TPM4P67936 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.51□□□□□ -1.37
TPM4P67936 AL049829.3-202ENST00000604278 711 ntBASIC6.51□□□□□ -1.37
TPM4P67936 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.51□□□□□ -1.37
TPM4P67936 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TPM4P67936 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.51□□□□□ -1.37
TPM4P67936 AC068726.1-201ENST00000610993 341 ntBASIC6.51□□□□□ -1.37
TPM4P67936 RFPL4AP6-201ENST00000616792 846 ntBASIC6.51□□□□□ -1.37
TPM4P67936 AC138965.3-201ENST00000623875 498 ntBASIC6.51□□□□□ -1.37
TPM4P67936 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
TPM4P67936 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM4P67936 Z95331.1-201ENST00000623075 23112 ntBASIC6.51□□□□□ -1.37
TPM4P67936 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.51□□□□□ -1.37
TPM4P67936 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM4P67936 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TPM4P67936 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TPM4P67936 MTCO1P28-201ENST00000574177 1528 ntBASIC6.5□□□□□ -1.37
TPM4P67936 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
TPM4P67936 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.5□□□□□ -1.37
TPM4P67936 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TPM4P67936 ABCC13-202ENST00000463099 3842 ntBASIC6.5□□□□□ -1.37
TPM4P67936 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TPM4P67936 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
TPM4P67936 AC011933.2-201ENST00000578539 2790 ntBASIC6.5□□□□□ -1.37
TPM4P67936 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TPM4P67936 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TPM4P67936 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
TPM4P67936 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TPM4P67936 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.5□□□□□ -1.37
TPM4P67936 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.5□□□□□ -1.37
TPM4P67936 AC130360.1-201ENST00000425489 1117 ntBASIC6.5□□□□□ -1.37
TPM4P67936 HMGN2P27-201ENST00000427352 270 ntBASIC6.5□□□□□ -1.37
TPM4P67936 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.5□□□□□ -1.37
TPM4P67936 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.5□□□□□ -1.37
TPM4P67936 AC023141.8-201ENST00000442554 208 ntBASIC6.5□□□□□ -1.37
TPM4P67936 MED28P3-201ENST00000444288 531 ntBASIC6.5□□□□□ -1.37
TPM4P67936 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.5□□□□□ -1.37
TPM4P67936 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.5□□□□□ -1.37
TPM4P67936 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TPM4P67936 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TPM4P67936 AC114324.2-202ENST00000503812 134 ntBASIC6.5□□□□□ -1.37
TPM4P67936 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.5□□□□□ -1.37
TPM4P67936 AC130365.2-201ENST00000525882 1201 ntBASIC6.5□□□□□ -1.37
TPM4P67936 AC009852.2-201ENST00000567898 485 ntBASIC6.5□□□□□ -1.37
TPM4P67936 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.5□□□□□ -1.37
TPM4P67936 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TPM4P67936 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.5□□□□□ -1.37
TPM4P67936 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.5□□□□□ -1.37
TPM4P67936 AL122023.1-201ENST00000622847 530 ntBASIC6.5□□□□□ -1.37
TPM4P67936 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.5□□□□□ -1.37
TPM4P67936 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TPM4P67936 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
TPM4P67936 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TPM4P67936 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TPM4P67936 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TPM4P67936 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.5□□□□□ -1.37
TPM4P67936 GNL2P1-201ENST00000451274 2190 ntBASIC6.5□□□□□ -1.37
TPM4P67936 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
TPM4P67936 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TPM4P67936 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TPM4P67936 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TPM4P67936 AC008079.2-201ENST00000623543 20396 ntBASIC6.49□□□□□ -1.37
TPM4P67936 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.49□□□□□ -1.37
TPM4P67936 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TPM4P67936 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
TPM4P67936 AC092681.1-201ENST00000297369 291 ntBASIC6.49□□□□□ -1.37
TPM4P67936 SNORA21-201ENST00000362423 132 ntBASIC6.49□□□□□ -1.37
TPM4P67936 RNA5SP77-201ENST00000365394 120 ntBASIC6.49□□□□□ -1.37
TPM4P67936 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
TPM4P67936 SNORA70.6-201ENST00000383934 134 ntBASIC6.49□□□□□ -1.37
TPM4P67936 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.49□□□□□ -1.37
TPM4P67936 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.49□□□□□ -1.37
TPM4P67936 AL445928.1-201ENST00000435545 222 ntBASIC6.49□□□□□ -1.37
TPM4P67936 AC015983.1-201ENST00000441577 373 ntBASIC6.49□□□□□ -1.37
TPM4P67936 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.49□□□□□ -1.37
TPM4P67936 FTLP8-201ENST00000446770 267 ntBASIC6.49□□□□□ -1.37
TPM4P67936 RN7SL790P-201ENST00000474043 298 ntBASIC6.49□□□□□ -1.37
TPM4P67936 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.49□□□□□ -1.37
TPM4P67936 SNX18P25-201ENST00000510539 758 ntBASIC6.49□□□□□ -1.37
TPM4P67936 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.49□□□□□ -1.37
TPM4P67936 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.49□□□□□ -1.37
TPM4P67936 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.49□□□□□ -1.37
TPM4P67936 AC005632.2-201ENST00000564271 828 ntBASIC6.49□□□□□ -1.37
TPM4P67936 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.49□□□□□ -1.37
TPM4P67936 GARSP1-201ENST00000570895 719 ntBASIC6.49□□□□□ -1.37
TPM4P67936 AC006120.1-201ENST00000579375 546 ntBASIC6.49□□□□□ -1.37
TPM4P67936 AP005136.2-201ENST00000583253 1049 ntBASIC6.49□□□□□ -1.37
TPM4P67936 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.49□□□□□ -1.37
TPM4P67936 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.49□□□□□ -1.37
TPM4P67936 AL078624.2-201ENST00000605063 554 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms