Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.71□□□□□ -1.5
SKP1P63208 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SKP1P63208 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SKP1P63208 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SKP1P63208 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
SKP1P63208 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SKP1P63208 AL034546.1-201ENST00000623740 3693 ntBASIC5.7□□□□□ -1.5
SKP1P63208 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.7□□□□□ -1.5
SKP1P63208 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SKP1P63208 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SKP1P63208 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SKP1P63208 AP002512.4-202ENST00000641599 4530 ntBASIC5.7□□□□□ -1.5
SKP1P63208 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SKP1P63208 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.7□□□□□ -1.5
SKP1P63208 AC004386.1-201ENST00000393214 761 ntBASIC5.7□□□□□ -1.5
SKP1P63208 AL121835.1-201ENST00000404250 354 ntBASIC5.7□□□□□ -1.5
SKP1P63208 SNRPEP6-201ENST00000407465 277 ntBASIC5.7□□□□□ -1.5
SKP1P63208 RNA5SP251-201ENST00000410614 137 ntBASIC5.7□□□□□ -1.5
SKP1P63208 AC015977.1-201ENST00000418887 292 ntBASIC5.7□□□□□ -1.5
SKP1P63208 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.7□□□□□ -1.5
SKP1P63208 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.7□□□□□ -1.5
SKP1P63208 AC099677.3-201ENST00000427081 395 ntBASIC5.7□□□□□ -1.5
SKP1P63208 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SKP1P63208 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.7□□□□□ -1.5
SKP1P63208 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.7□□□□□ -1.5
SKP1P63208 CUBNP2-201ENST00000443534 1139 ntBASIC5.7□□□□□ -1.5
SKP1P63208 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SKP1P63208 OR52E7P-201ENST00000452394 933 ntBASIC5.7□□□□□ -1.5
SKP1P63208 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.7□□□□□ -1.5
SKP1P63208 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.7□□□□□ -1.5
SKP1P63208 AC099521.1-201ENST00000482557 334 ntBASIC5.7□□□□□ -1.5
SKP1P63208 AL158068.1-201ENST00000506116 616 ntBASIC5.7□□□□□ -1.5
SKP1P63208 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.7□□□□□ -1.5
SKP1P63208 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.7□□□□□ -1.5
SKP1P63208 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.7□□□□□ -1.5
SKP1P63208 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.7□□□□□ -1.5
SKP1P63208 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.7□□□□□ -1.5
SKP1P63208 MIR132-201ENST00000591554 101 ntBASIC5.7□□□□□ -1.5
SKP1P63208 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.7□□□□□ -1.5
SKP1P63208 MIR6793-201ENST00000612376 63 ntBASIC5.7□□□□□ -1.5
SKP1P63208 MIR6071-201ENST00000616741 78 ntBASIC5.7□□□□□ -1.5
SKP1P63208 AL445670.1-201ENST00000618889 801 ntBASIC5.7□□□□□ -1.5
SKP1P63208 AC096708.4-201ENST00000620563 552 ntBASIC5.7□□□□□ -1.5
SKP1P63208 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.7□□□□□ -1.5
SKP1P63208 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SKP1P63208 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SKP1P63208 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SKP1P63208 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SKP1P63208 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SKP1P63208 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.7□□□□□ -1.5
SKP1P63208 AC020633.1-201ENST00000468439 2247 ntBASIC5.7□□□□□ -1.5
SKP1P63208 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SKP1P63208 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SKP1P63208 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.69□□□□□ -1.5
SKP1P63208 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SKP1P63208 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SKP1P63208 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SKP1P63208 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SKP1P63208 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SKP1P63208 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SKP1P63208 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.69□□□□□ -1.5
SKP1P63208 AL121839.2-201ENST00000565058 6943 ntBASIC5.69□□□□□ -1.5
SKP1P63208 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.69□□□□□ -1.5
SKP1P63208 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SKP1P63208 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SKP1P63208 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SKP1P63208 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SKP1P63208 AC023490.2-201ENST00000359859 470 ntBASIC5.69□□□□□ -1.5
SKP1P63208 RNA5SP110-201ENST00000362638 115 ntBASIC5.69□□□□□ -1.5
SKP1P63208 MIR130B-202ENST00000385018 82 ntBASIC5.69□□□□□ -1.5
SKP1P63208 AL096800.1-201ENST00000405326 893 ntBASIC5.69□□□□□ -1.5
SKP1P63208 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SKP1P63208 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.69□□□□□ -1.5
SKP1P63208 AL445687.2-201ENST00000458156 728 ntBASIC5.69□□□□□ -1.5
SKP1P63208 ACA64.1-201ENST00000459171 127 ntBASIC5.69□□□□□ -1.5
SKP1P63208 AL122020.1-201ENST00000472287 459 ntBASIC5.69□□□□□ -1.5
SKP1P63208 AC090589.1-201ENST00000473109 362 ntBASIC5.69□□□□□ -1.5
SKP1P63208 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.69□□□□□ -1.5
SKP1P63208 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.69□□□□□ -1.5
SKP1P63208 LDHAP1-201ENST00000509421 992 ntBASIC5.69□□□□□ -1.5
SKP1P63208 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.69□□□□□ -1.5
SKP1P63208 GAPDHP71-201ENST00000511530 1003 ntBASIC5.69□□□□□ -1.5
SKP1P63208 RN7SKP238-201ENST00000516483 249 ntBASIC5.69□□□□□ -1.5
SKP1P63208 RNU6-964P-201ENST00000516524 69 ntBASIC5.69□□□□□ -1.5
SKP1P63208 IGKV3D-25-201ENST00000519599 235 ntBASIC5.69□□□□□ -1.5
SKP1P63208 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.69□□□□□ -1.5
SKP1P63208 AL049779.3-201ENST00000557141 606 ntBASIC5.69□□□□□ -1.5
SKP1P63208 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.69□□□□□ -1.5
SKP1P63208 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.69□□□□□ -1.5
SKP1P63208 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.69□□□□□ -1.5
SKP1P63208 AL034374.2-201ENST00000605281 548 ntBASIC5.69□□□□□ -1.5
SKP1P63208 AL139099.4-201ENST00000614802 114 ntBASIC5.69□□□□□ -1.5
SKP1P63208 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.69□□□□□ -1.5
SKP1P63208 AL357562.1-201ENST00000624911 609 ntBASIC5.69□□□□□ -1.5
SKP1P63208 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.69□□□□□ -1.5
SKP1P63208 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.69□□□□□ -1.5
SKP1P63208 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SKP1P63208 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.69□□□□□ -1.5
SKP1P63208 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SKP1P63208 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms