Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC5.95□□□□□ -1.46
CLRN1P58418 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 AC013488.1-201ENST00000526618 1838 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 AC009779.8-201ENST00000641684 4384 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 HSPD1P7-201ENST00000447985 1686 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.94□□□□□ -1.46
CLRN1P58418 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLRN1P58418 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLRN1P58418 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CLRN1P58418 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLRN1P58418 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CLRN1P58418 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLRN1P58418 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.94□□□□□ -1.46
CLRN1P58418 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.94□□□□□ -1.46
CLRN1P58418 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CLRN1P58418 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.94□□□□□ -1.46
CLRN1P58418 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.94□□□□□ -1.46
CLRN1P58418 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLRN1P58418 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLRN1P58418 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLRN1P58418 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CLRN1P58418 OR5H2-201ENST00000355273 945 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CLRN1P58418 Y_RNA.169-201ENST00000363745 96 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 RN7SKP130-201ENST00000364924 301 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 RNA5SP152-201ENST00000365184 110 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.94□□□□□ -1.46
CLRN1P58418 U6.112-201ENST00000384129 70 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 RNU6-636P-201ENST00000384598 107 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 LDHAP5-201ENST00000394996 622 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.94□□□□□ -1.46
CLRN1P58418 RPL7P27-201ENST00000403775 720 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 RN7SKP278-201ENST00000410504 342 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.94□□□□□ -1.46
CLRN1P58418 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.94□□□□□ -1.46
CLRN1P58418 MORF4L1P6-201ENST00000418771 268 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 HMGB1P49-201ENST00000418882 569 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 EIF4A1P1-201ENST00000420241 934 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 AC092646.1-201ENST00000427142 901 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 Z68868.1-201ENST00000429048 544 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLRN1P58418 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.94□□□□□ -1.46
CLRN1P58418 AC084290.1-201ENST00000434995 374 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.94□□□□□ -1.46
CLRN1P58418 GAPDHP20-201ENST00000444107 1007 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.94□□□□□ -1.46
CLRN1P58418 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.94□□□□□ -1.46
CLRN1P58418 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLRN1P58418 AL139156.3-201ENST00000454802 394 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 AC093719.1-201ENST00000480427 441 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 BET1P1-201ENST00000482276 359 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.94□□□□□ -1.46
CLRN1P58418 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.94□□□□□ -1.46
CLRN1P58418 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.94□□□□□ -1.46
CLRN1P58418 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLRN1P58418 AC008868.1-201ENST00000509786 737 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 AC096661.1-201ENST00000515870 822 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC5.94□□□□□ -1.46
CLRN1P58418 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.94□□□□□ -1.46
CLRN1P58418 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.94□□□□□ -1.46
CLRN1P58418 PHBP2-201ENST00000532859 806 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 AL356057.1-201ENST00000533798 831 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.94□□□□□ -1.46
CLRN1P58418 AC011611.6-201ENST00000547483 255 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.94□□□□□ -1.46
CLRN1P58418 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.94□□□□□ -1.46
CLRN1P58418 AL049830.4-201ENST00000555149 351 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.94□□□□□ -1.46
CLRN1P58418 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.94□□□□□ -1.46
CLRN1P58418 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC5.94□□□□□ -1.46
CLRN1P58418 AC012254.4-201ENST00000588843 273 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.94□□□□□ -1.46
CLRN1P58418 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.94□□□□□ -1.46
CLRN1P58418 AC122108.2-201ENST00000611946 526 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.94□□□□□ -1.46
CLRN1P58418 MIR3974-201ENST00000637126 96 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.94□□□□□ -1.46
CLRN1P58418 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLRN1P58418 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.94□□□□□ -1.46
CLRN1P58418 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.94□□□□□ -1.46
CLRN1P58418 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.94□□□□□ -1.46
CLRN1P58418 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLRN1P58418 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLRN1P58418 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLRN1P58418 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.94□□□□□ -1.46
CLRN1P58418 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
CLRN1P58418 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.94□□□□□ -1.46
CLRN1P58418 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CLRN1P58418 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLRN1P58418 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLRN1P58418 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.94□□□□□ -1.46
CLRN1P58418 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLRN1P58418 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLRN1P58418 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.94□□□□□ -1.46
CLRN1P58418 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CLRN1P58418 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CLRN1P58418 AC022306.1-201ENST00000560489 1562 ntBASIC5.93□□□□□ -1.46
CLRN1P58418 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms