Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RN7SKP166-201ENST00000410812 305 ntBASIC5.7□□□□□ -1.5
VSX2P58304 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.7□□□□□ -1.5
VSX2P58304 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.7□□□□□ -1.5
VSX2P58304 IPPKP1-201ENST00000422501 768 ntBASIC5.7□□□□□ -1.5
VSX2P58304 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.7□□□□□ -1.5
VSX2P58304 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.7□□□□□ -1.5
VSX2P58304 NDUFS5P5-201ENST00000437256 321 ntBASIC5.7□□□□□ -1.5
VSX2P58304 BMS1P10-201ENST00000443754 1120 ntBASIC5.7□□□□□ -1.5
VSX2P58304 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.7□□□□□ -1.5
VSX2P58304 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.7□□□□□ -1.5
VSX2P58304 RPL12P24-201ENST00000474907 486 ntBASIC5.7□□□□□ -1.5
VSX2P58304 AC093815.1-201ENST00000508637 280 ntBASIC5.7□□□□□ -1.5
VSX2P58304 CYP4F27P-201ENST00000514557 494 ntBASIC5.7□□□□□ -1.5
VSX2P58304 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.7□□□□□ -1.5
VSX2P58304 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.7□□□□□ -1.5
VSX2P58304 NANOGNBP2-201ENST00000544753 553 ntBASIC5.7□□□□□ -1.5
VSX2P58304 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.7□□□□□ -1.5
VSX2P58304 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.7□□□□□ -1.5
VSX2P58304 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.7□□□□□ -1.5
VSX2P58304 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.7□□□□□ -1.5
VSX2P58304 AP001962.1-201ENST00000624114 559 ntBASIC5.7□□□□□ -1.5
VSX2P58304 AL355480.1-201ENST00000629041 99 ntBASIC5.7□□□□□ -1.5
VSX2P58304 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.7□□□□□ -1.5
VSX2P58304 AL137141.1-201ENST00000624622 4836 ntBASIC5.7□□□□□ -1.5
VSX2P58304 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VSX2P58304 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VSX2P58304 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VSX2P58304 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
VSX2P58304 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
VSX2P58304 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VSX2P58304 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
VSX2P58304 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VSX2P58304 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VSX2P58304 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VSX2P58304 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VSX2P58304 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
VSX2P58304 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
VSX2P58304 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VSX2P58304 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
VSX2P58304 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.69□□□□□ -1.5
VSX2P58304 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VSX2P58304 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VSX2P58304 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
VSX2P58304 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VSX2P58304 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
VSX2P58304 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
VSX2P58304 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.69□□□□□ -1.5
VSX2P58304 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VSX2P58304 PARP4P2-201ENST00000446672 3326 ntBASIC5.69□□□□□ -1.5
VSX2P58304 SELENOWP1-201ENST00000322792 252 ntBASIC5.69□□□□□ -1.5
VSX2P58304 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VSX2P58304 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VSX2P58304 RN7SKP77-201ENST00000363261 353 ntBASIC5.69□□□□□ -1.5
VSX2P58304 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VSX2P58304 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VSX2P58304 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.69□□□□□ -1.5
VSX2P58304 BX284632.2-201ENST00000421091 399 ntBASIC5.69□□□□□ -1.5
VSX2P58304 RPS3P2-201ENST00000421346 701 ntBASIC5.69□□□□□ -1.5
VSX2P58304 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.69□□□□□ -1.5
VSX2P58304 CDY8P-201ENST00000428380 1279 ntBASIC5.69□□□□□ -1.5
VSX2P58304 HSPE1P27-201ENST00000430808 296 ntBASIC5.69□□□□□ -1.5
VSX2P58304 AL389925.1-201ENST00000432257 728 ntBASIC5.69□□□□□ -1.5
VSX2P58304 AL731534.1-201ENST00000434711 269 ntBASIC5.69□□□□□ -1.5
VSX2P58304 VN1R110P-201ENST00000438988 971 ntBASIC5.69□□□□□ -1.5
VSX2P58304 AL512605.1-202ENST00000441919 381 ntBASIC5.69□□□□□ -1.5
VSX2P58304 RPS7P3-201ENST00000443360 580 ntBASIC5.69□□□□□ -1.5
VSX2P58304 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.69□□□□□ -1.5
VSX2P58304 AL359955.2-201ENST00000445380 353 ntBASIC5.69□□□□□ -1.5
VSX2P58304 CDY20P-201ENST00000447528 1279 ntBASIC5.69□□□□□ -1.5
VSX2P58304 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VSX2P58304 SDC4P-201ENST00000453285 601 ntBASIC5.69□□□□□ -1.5
VSX2P58304 GEMIN2P1-201ENST00000454246 752 ntBASIC5.69□□□□□ -1.5
VSX2P58304 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.69□□□□□ -1.5
VSX2P58304 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VSX2P58304 AC008945.1-201ENST00000505144 499 ntBASIC5.69□□□□□ -1.5
VSX2P58304 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.69□□□□□ -1.5
VSX2P58304 AC090568.1-201ENST00000509499 856 ntBASIC5.69□□□□□ -1.5
VSX2P58304 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.69□□□□□ -1.5
VSX2P58304 PCNAP4-201ENST00000532690 730 ntBASIC5.69□□□□□ -1.5
VSX2P58304 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.69□□□□□ -1.5
VSX2P58304 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.69□□□□□ -1.5
VSX2P58304 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.69□□□□□ -1.5
VSX2P58304 AC092121.1-201ENST00000569452 202 ntBASIC5.69□□□□□ -1.5
VSX2P58304 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.69□□□□□ -1.5
VSX2P58304 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.69□□□□□ -1.5
VSX2P58304 AL136131.3-201ENST00000607600 188 ntBASIC5.69□□□□□ -1.5
VSX2P58304 AC129915.3-201ENST00000634128 948 ntBASIC5.69□□□□□ -1.5
VSX2P58304 AC027088.4-201ENST00000611559 1947 ntBASIC5.69□□□□□ -1.5
VSX2P58304 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.69□□□□□ -1.5
VSX2P58304 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VSX2P58304 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
VSX2P58304 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VSX2P58304 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
VSX2P58304 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
VSX2P58304 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VSX2P58304 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
VSX2P58304 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VSX2P58304 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
VSX2P58304 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VSX2P58304 AC092070.2-203ENST00000598377 3644 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms