Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH13P55290 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH13P55290 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH13P55290 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH13P55290 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CDH13P55290 AC018628.1-201ENST00000624147 3819 ntBASIC5.85□□□□□ -1.47
CDH13P55290 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH13P55290 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDH13P55290 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH13P55290 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.84□□□□□ -1.47
CDH13P55290 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDH13P55290 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDH13P55290 AC005261.6-201ENST00000623072 1387 ntBASIC5.84□□□□□ -1.47
CDH13P55290 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CDH13P55290 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH13P55290 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH13P55290 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH13P55290 RNU6-1331P-201ENST00000363658 106 ntBASIC5.84□□□□□ -1.47
CDH13P55290 AC083799.1-201ENST00000366451 910 ntBASIC5.84□□□□□ -1.47
CDH13P55290 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.84□□□□□ -1.47
CDH13P55290 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.47
CDH13P55290 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CDH13P55290 DHFRP5-201ENST00000406944 564 ntBASIC5.84□□□□□ -1.47
CDH13P55290 AL139805.1-201ENST00000407837 289 ntBASIC5.84□□□□□ -1.47
CDH13P55290 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.84□□□□□ -1.47
CDH13P55290 RPS7P8-201ENST00000418311 581 ntBASIC5.84□□□□□ -1.47
CDH13P55290 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH13P55290 Z85994.2-201ENST00000434327 452 ntBASIC5.84□□□□□ -1.47
CDH13P55290 AC073410.1-201ENST00000435125 589 ntBASIC5.84□□□□□ -1.47
CDH13P55290 RPL12P49-201ENST00000441100 121 ntBASIC5.84□□□□□ -1.47
CDH13P55290 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.84□□□□□ -1.47
CDH13P55290 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.84□□□□□ -1.47
CDH13P55290 RN7SL836P-201ENST00000476140 296 ntBASIC5.84□□□□□ -1.47
CDH13P55290 AC093827.1-201ENST00000480094 861 ntBASIC5.84□□□□□ -1.47
CDH13P55290 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
CDH13P55290 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH13P55290 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.84□□□□□ -1.47
CDH13P55290 snoU109.5-201ENST00000516231 132 ntBASIC5.84□□□□□ -1.47
CDH13P55290 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.84□□□□□ -1.47
CDH13P55290 OR56A7P-201ENST00000524865 941 ntBASIC5.84□□□□□ -1.47
CDH13P55290 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.84□□□□□ -1.47
CDH13P55290 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH13P55290 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.84□□□□□ -1.47
CDH13P55290 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.84□□□□□ -1.47
CDH13P55290 SMIM12P1-201ENST00000603004 274 ntBASIC5.84□□□□□ -1.47
CDH13P55290 WBP1LP12-201ENST00000604449 331 ntBASIC5.84□□□□□ -1.47
CDH13P55290 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.84□□□□□ -1.47
CDH13P55290 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CDH13P55290 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
CDH13P55290 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CDH13P55290 AC123769.1-201ENST00000530992 3192 ntBASIC5.84□□□□□ -1.47
CDH13P55290 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH13P55290 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH13P55290 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CDH13P55290 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CDH13P55290 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CDH13P55290 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.84□□□□□ -1.48
CDH13P55290 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
CDH13P55290 THAP12P9-201ENST00000503971 2360 ntBASIC5.84□□□□□ -1.48
CDH13P55290 AC130304.1-201ENST00000622942 2385 ntBASIC5.84□□□□□ -1.48
CDH13P55290 AC011933.2-201ENST00000578539 2790 ntBASIC5.84□□□□□ -1.48
CDH13P55290 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH13P55290 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH13P55290 AC138907.8-201ENST00000623981 2256 ntBASIC5.83□□□□□ -1.48
CDH13P55290 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH13P55290 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH13P55290 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH13P55290 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CDH13P55290 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CDH13P55290 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH13P55290 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH13P55290 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH13P55290 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.83□□□□□ -1.48
CDH13P55290 AL132875.1-201ENST00000403623 949 ntBASIC5.83□□□□□ -1.48
CDH13P55290 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH13P55290 RN7SKP108-201ENST00000411367 328 ntBASIC5.83□□□□□ -1.48
CDH13P55290 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.83□□□□□ -1.48
CDH13P55290 AC098592.2-201ENST00000413158 265 ntBASIC5.83□□□□□ -1.48
CDH13P55290 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.83□□□□□ -1.48
CDH13P55290 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH13P55290 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH13P55290 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH13P55290 AL392003.1-201ENST00000434394 243 ntBASIC5.83□□□□□ -1.48
CDH13P55290 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH13P55290 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.83□□□□□ -1.48
CDH13P55290 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH13P55290 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH13P55290 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH13P55290 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH13P55290 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH13P55290 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.83□□□□□ -1.48
CDH13P55290 AC067805.1-201ENST00000559344 470 ntBASIC5.83□□□□□ -1.48
CDH13P55290 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.83□□□□□ -1.48
CDH13P55290 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH13P55290 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH13P55290 AC005229.3-201ENST00000603438 323 ntBASIC5.83□□□□□ -1.48
CDH13P55290 NDUFB9P1-201ENST00000604683 510 ntBASIC5.83□□□□□ -1.48
CDH13P55290 AL645933.2-201ENST00000606743 1207 ntBASIC5.83□□□□□ -1.48
CDH13P55290 AL118556.2-201ENST00000614375 824 ntBASIC5.83□□□□□ -1.48
CDH13P55290 AC012676.3-201ENST00000614983 479 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms