Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CDH11P55287 SNORA43.1-201ENST00000364863 140 ntBASIC5.56□□□□□ -1.52
CDH11P55287 RNA5SP198-201ENST00000410376 127 ntBASIC5.56□□□□□ -1.52
CDH11P55287 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH11P55287 PSMD10P2-201ENST00000432890 672 ntBASIC5.56□□□□□ -1.52
CDH11P55287 RPS3AP38-201ENST00000435889 763 ntBASIC5.56□□□□□ -1.52
CDH11P55287 POU5F1P5-201ENST00000445059 658 ntBASIC5.56□□□□□ -1.52
CDH11P55287 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH11P55287 RAD1P2-201ENST00000446414 663 ntBASIC5.56□□□□□ -1.52
CDH11P55287 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH11P55287 AC009963.4-201ENST00000448535 339 ntBASIC5.56□□□□□ -1.52
CDH11P55287 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH11P55287 AP002371.1-201ENST00000463604 433 ntBASIC5.56□□□□□ -1.52
CDH11P55287 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH11P55287 RN7SL104P-201ENST00000498686 293 ntBASIC5.56□□□□□ -1.52
CDH11P55287 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH11P55287 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH11P55287 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH11P55287 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH11P55287 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH11P55287 AC093815.1-201ENST00000508637 280 ntBASIC5.56□□□□□ -1.52
CDH11P55287 SNX18P25-201ENST00000510539 758 ntBASIC5.56□□□□□ -1.52
CDH11P55287 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH11P55287 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH11P55287 AC004232.2-201ENST00000574245 821 ntBASIC5.56□□□□□ -1.52
CDH11P55287 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH11P55287 AC005332.4-201ENST00000592752 579 ntBASIC5.56□□□□□ -1.52
CDH11P55287 AC005520.3-201ENST00000602874 370 ntBASIC5.56□□□□□ -1.52
CDH11P55287 RPSAP75-201ENST00000605848 301 ntBASIC5.56□□□□□ -1.52
CDH11P55287 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH11P55287 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.56□□□□□ -1.52
CDH11P55287 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH11P55287 AC239868.2-201ENST00000564237 4527 ntBASIC5.56□□□□□ -1.52
CDH11P55287 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH11P55287 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH11P55287 AC027575.3-201ENST00000583058 2747 ntBASIC5.56□□□□□ -1.52
CDH11P55287 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH11P55287 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH11P55287 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH11P55287 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CDH11P55287 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDH11P55287 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH11P55287 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.56□□□□□ -1.52
CDH11P55287 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDH11P55287 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.56□□□□□ -1.52
CDH11P55287 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH11P55287 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CDH11P55287 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH11P55287 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH11P55287 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH11P55287 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH11P55287 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH11P55287 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH11P55287 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH11P55287 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CDH11P55287 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH11P55287 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CDH11P55287 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH11P55287 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CDH11P55287 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CDH11P55287 OR7E156P-201ENST00000400303 464 ntBASIC5.55□□□□□ -1.52
CDH11P55287 RN7SKP17-201ENST00000411242 351 ntBASIC5.55□□□□□ -1.52
CDH11P55287 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH11P55287 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH11P55287 AC092865.3-201ENST00000425390 1026 ntBASIC5.55□□□□□ -1.52
CDH11P55287 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH11P55287 GTF2IP14-201ENST00000441415 586 ntBASIC5.55□□□□□ -1.52
CDH11P55287 AL645936.1-201ENST00000441979 518 ntBASIC5.55□□□□□ -1.52
CDH11P55287 MTND3P4-201ENST00000453537 303 ntBASIC5.55□□□□□ -1.52
CDH11P55287 RN7SL352P-201ENST00000466002 277 ntBASIC5.55□□□□□ -1.52
CDH11P55287 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH11P55287 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH11P55287 AP002453.1-201ENST00000492327 668 ntBASIC5.55□□□□□ -1.52
CDH11P55287 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
CDH11P55287 AC091874.2-201ENST00000505889 720 ntBASIC5.55□□□□□ -1.52
CDH11P55287 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CDH11P55287 IGHV4-55-201ENST00000520889 368 ntBASIC5.55□□□□□ -1.52
CDH11P55287 AC005363.1-201ENST00000530779 351 ntBASIC5.55□□□□□ -1.52
CDH11P55287 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.55□□□□□ -1.52
CDH11P55287 AC006512.2-201ENST00000543250 486 ntBASIC5.55□□□□□ -1.52
CDH11P55287 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.55□□□□□ -1.52
CDH11P55287 AC092865.1-201ENST00000544395 1023 ntBASIC5.55□□□□□ -1.52
CDH11P55287 AL049779.3-201ENST00000557141 606 ntBASIC5.55□□□□□ -1.52
CDH11P55287 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH11P55287 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH11P55287 AC011270.1-201ENST00000558606 583 ntBASIC5.55□□□□□ -1.52
CDH11P55287 AC090888.3-201ENST00000558917 509 ntBASIC5.55□□□□□ -1.52
CDH11P55287 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH11P55287 MIR3908-201ENST00000579798 126 ntBASIC5.55□□□□□ -1.52
CDH11P55287 AC134669.1-201ENST00000581275 672 ntBASIC5.55□□□□□ -1.52
CDH11P55287 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CDH11P55287 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.55□□□□□ -1.52
CDH11P55287 AC005229.3-201ENST00000603438 323 ntBASIC5.55□□□□□ -1.52
CDH11P55287 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.55□□□□□ -1.52
CDH11P55287 AC073592.7-201ENST00000623659 507 ntBASIC5.55□□□□□ -1.52
CDH11P55287 AC025262.3-201ENST00000623666 360 ntBASIC5.55□□□□□ -1.52
CDH11P55287 AL357140.4-201ENST00000636827 412 ntBASIC5.55□□□□□ -1.52
CDH11P55287 OR7A1P-202ENST00000641542 1158 ntBASIC5.55□□□□□ -1.52
CDH11P55287 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CDH11P55287 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 283.7 ms