Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC7.37□□□□□ -1.23
MRE11P49959 RN7SL174P-201ENST00000475578 289 ntBASIC7.37□□□□□ -1.23
MRE11P49959 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.37□□□□□ -1.23
MRE11P49959 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.37□□□□□ -1.23
MRE11P49959 AC092593.2-201ENST00000513866 913 ntBASIC7.37□□□□□ -1.23
MRE11P49959 DCAF13P2-201ENST00000514188 555 ntBASIC7.37□□□□□ -1.23
MRE11P49959 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.37□□□□□ -1.23
MRE11P49959 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.37□□□□□ -1.23
MRE11P49959 AC021820.1-201ENST00000525564 808 ntBASIC7.37□□□□□ -1.23
MRE11P49959 EIF4A2P3-201ENST00000525903 1055 ntBASIC7.37□□□□□ -1.23
MRE11P49959 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.37□□□□□ -1.23
MRE11P49959 AP000619.2-201ENST00000546014 969 ntBASIC7.37□□□□□ -1.23
MRE11P49959 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC7.37□□□□□ -1.23
MRE11P49959 MIR4700-201ENST00000578311 74 ntBASIC7.37□□□□□ -1.23
MRE11P49959 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.37□□□□□ -1.23
MRE11P49959 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC7.37□□□□□ -1.23
MRE11P49959 MIR4428-201ENST00000584884 73 ntBASIC7.37□□□□□ -1.23
MRE11P49959 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.37□□□□□ -1.23
MRE11P49959 AL021368.3-201ENST00000607119 578 ntBASIC7.37□□□□□ -1.23
MRE11P49959 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.37□□□□□ -1.23
MRE11P49959 AC089999.3-201ENST00000622440 577 ntBASIC7.37□□□□□ -1.23
MRE11P49959 AP003485.1-201ENST00000625093 753 ntBASIC7.37□□□□□ -1.23
MRE11P49959 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.37□□□□□ -1.23
MRE11P49959 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC7.37□□□□□ -1.23
MRE11P49959 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
MRE11P49959 OR4G3P-201ENST00000633500 913 ntBASIC7.37□□□□□ -1.23
MRE11P49959 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
MRE11P49959 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
MRE11P49959 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.37□□□□□ -1.23
MRE11P49959 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
MRE11P49959 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
MRE11P49959 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
MRE11P49959 AP001002.1-201ENST00000625148 1513 ntBASIC7.37□□□□□ -1.23
MRE11P49959 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
MRE11P49959 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
MRE11P49959 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
MRE11P49959 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
MRE11P49959 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
MRE11P49959 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
MRE11P49959 CR383656.5-201ENST00000547616 1340 ntBASIC7.36□□□□□ -1.23
MRE11P49959 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
MRE11P49959 AC004656.1-201ENST00000568479 4951 ntBASIC7.36□□□□□ -1.23
MRE11P49959 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
MRE11P49959 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
MRE11P49959 MIR133A2-201ENST00000347538 102 ntBASIC7.36□□□□□ -1.23
MRE11P49959 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
MRE11P49959 RNA5SP279-201ENST00000365513 117 ntBASIC7.36□□□□□ -1.23
MRE11P49959 RN7SKP81-201ENST00000365603 331 ntBASIC7.36□□□□□ -1.23
MRE11P49959 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.36□□□□□ -1.23
MRE11P49959 RNA5SP280-201ENST00000411230 115 ntBASIC7.36□□□□□ -1.23
MRE11P49959 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
MRE11P49959 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.36□□□□□ -1.23
MRE11P49959 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.36□□□□□ -1.23
MRE11P49959 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.36□□□□□ -1.23
MRE11P49959 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.36□□□□□ -1.23
MRE11P49959 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC7.36□□□□□ -1.23
MRE11P49959 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC7.36□□□□□ -1.23
MRE11P49959 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.36□□□□□ -1.23
MRE11P49959 Z80107.1-201ENST00000436830 412 ntBASIC7.36□□□□□ -1.23
MRE11P49959 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC7.36□□□□□ -1.23
MRE11P49959 AL136455.1-201ENST00000441083 1240 ntBASIC7.36□□□□□ -1.23
MRE11P49959 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC7.36□□□□□ -1.23
MRE11P49959 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.36□□□□□ -1.23
MRE11P49959 RN7SL70P-201ENST00000478322 302 ntBASIC7.36□□□□□ -1.23
MRE11P49959 AC021146.11-201ENST00000503319 491 ntBASIC7.36□□□□□ -1.23
MRE11P49959 MORF4L2P1-201ENST00000503761 858 ntBASIC7.36□□□□□ -1.23
MRE11P49959 AC113367.2-201ENST00000505749 160 ntBASIC7.36□□□□□ -1.23
MRE11P49959 AC112484.3-201ENST00000505910 329 ntBASIC7.36□□□□□ -1.23
MRE11P49959 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
MRE11P49959 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.36□□□□□ -1.23
MRE11P49959 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.36□□□□□ -1.23
MRE11P49959 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.36□□□□□ -1.23
MRE11P49959 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.36□□□□□ -1.23
MRE11P49959 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC7.36□□□□□ -1.23
MRE11P49959 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC7.36□□□□□ -1.23
MRE11P49959 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
MRE11P49959 AC090022.1-201ENST00000546569 311 ntBASIC7.36□□□□□ -1.23
MRE11P49959 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.36□□□□□ -1.23
MRE11P49959 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
MRE11P49959 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.36□□□□□ -1.23
MRE11P49959 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
MRE11P49959 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC7.36□□□□□ -1.23
MRE11P49959 AL138895.2-201ENST00000603019 178 ntBASIC7.36□□□□□ -1.23
MRE11P49959 AC011891.2-201ENST00000604949 397 ntBASIC7.36□□□□□ -1.23
MRE11P49959 MIR6721-201ENST00000617181 87 ntBASIC7.36□□□□□ -1.23
MRE11P49959 AP001264.1-201ENST00000620602 703 ntBASIC7.36□□□□□ -1.23
MRE11P49959 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
MRE11P49959 AC097372.4-201ENST00000625025 466 ntBASIC7.36□□□□□ -1.23
MRE11P49959 TEX41-255ENST00000626404 610 ntTSL 5 BASIC7.36□□□□□ -1.23
MRE11P49959 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
MRE11P49959 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC7.36□□□□□ -1.23
MRE11P49959 FANCD2P2-201ENST00000437591 1400 ntBASIC7.35□□□□□ -1.23
MRE11P49959 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.35□□□□□ -1.23
MRE11P49959 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC7.35□□□□□ -1.23
MRE11P49959 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
MRE11P49959 AL121768.1-201ENST00000613917 2544 ntBASIC7.35□□□□□ -1.23
MRE11P49959 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
MRE11P49959 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.35□□□□□ -1.23
MRE11P49959 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
MRE11P49959 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms