Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC068768.2-201ENST00000602352 343 ntBASIC5.3□□□□□ -1.56
CSNK1A1P48729 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.3□□□□□ -1.56
CSNK1A1P48729 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.3□□□□□ -1.56
CSNK1A1P48729 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CSNK1A1P48729 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CSNK1A1P48729 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.3□□□□□ -1.56
CSNK1A1P48729 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CSNK1A1P48729 RBPJP7-201ENST00000442803 1447 ntBASIC5.3□□□□□ -1.56
CSNK1A1P48729 RBPJP5-201ENST00000449433 1447 ntBASIC5.3□□□□□ -1.56
CSNK1A1P48729 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.3□□□□□ -1.56
CSNK1A1P48729 AL161912.4-201ENST00000623889 2468 ntBASIC5.3□□□□□ -1.56
CSNK1A1P48729 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CSNK1A1P48729 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CSNK1A1P48729 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CSNK1A1P48729 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CSNK1A1P48729 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CSNK1A1P48729 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CSNK1A1P48729 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 AC104966.1-201ENST00000467010 1464 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CSNK1A1P48729 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CSNK1A1P48729 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 GNG5P2-201ENST00000372054 207 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CSNK1A1P48729 MIR130B-202ENST00000385018 82 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CSNK1A1P48729 REREP1Y-201ENST00000422655 198 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 RPS3AP38-201ENST00000435889 763 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 PNKDP1-201ENST00000435914 430 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 REREP2Y-201ENST00000439103 200 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 AC068228.1-201ENST00000461723 211 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 PFN1P6-201ENST00000476786 399 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 TRBV5-2-201ENST00000489095 273 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 AC008629.2-201ENST00000503783 483 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 AP003396.4-201ENST00000527574 265 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 AC244502.2-201ENST00000543361 851 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CSNK1A1P48729 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CSNK1A1P48729 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 AC091167.5-201ENST00000605689 894 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 MIR6780B-201ENST00000610307 79 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 AL021918.2-201ENST00000613415 194 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 AC245014.3-201ENST00000618589 347 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 AL591926.1-201ENST00000620542 217 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 AC096708.4-201ENST00000620563 552 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 AC073592.6-201ENST00000624271 415 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CSNK1A1P48729 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CSNK1A1P48729 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 AC093225.1-201ENST00000506867 1408 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 AP001284.1-201ENST00000528393 2118 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CSNK1A1P48729 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.29□□□□□ -1.56
CSNK1A1P48729 AL354854.1-201ENST00000455940 1363 ntBASIC5.29□□□□□ -1.56
CSNK1A1P48729 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CSNK1A1P48729 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
CSNK1A1P48729 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CSNK1A1P48729 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.28□□□□□ -1.56
CSNK1A1P48729 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.28□□□□□ -1.56
CSNK1A1P48729 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CSNK1A1P48729 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CSNK1A1P48729 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CSNK1A1P48729 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CSNK1A1P48729 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CSNK1A1P48729 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CSNK1A1P48729 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CSNK1A1P48729 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.28□□□□□ -1.56
CSNK1A1P48729 AL121839.2-201ENST00000565058 6943 ntBASIC5.28□□□□□ -1.56
CSNK1A1P48729 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CSNK1A1P48729 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
CSNK1A1P48729 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CSNK1A1P48729 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CSNK1A1P48729 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.28□□□□□ -1.56
CSNK1A1P48729 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.28□□□□□ -1.56
CSNK1A1P48729 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.28□□□□□ -1.56
CSNK1A1P48729 AL445928.1-201ENST00000435545 222 ntBASIC5.28□□□□□ -1.56
CSNK1A1P48729 RPS7P3-201ENST00000443360 580 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms