Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.8□□□□□ -1.32
COL4A5P29400 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.8□□□□□ -1.32
COL4A5P29400 AZGP1P2-201ENST00000454506 345 ntBASIC6.8□□□□□ -1.32
COL4A5P29400 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.8□□□□□ -1.32
COL4A5P29400 AC083982.1-201ENST00000485679 344 ntBASIC6.8□□□□□ -1.32
COL4A5P29400 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.8□□□□□ -1.32
COL4A5P29400 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.8□□□□□ -1.32
COL4A5P29400 RPL10P14-201ENST00000565265 298 ntBASIC6.8□□□□□ -1.32
COL4A5P29400 MIR4480-201ENST00000582492 71 ntBASIC6.8□□□□□ -1.32
COL4A5P29400 MIR378J-201ENST00000611988 109 ntBASIC6.8□□□□□ -1.32
COL4A5P29400 AC090527.3-201ENST00000619041 548 ntBASIC6.8□□□□□ -1.32
COL4A5P29400 AP002799.1-201ENST00000623552 423 ntBASIC6.8□□□□□ -1.32
COL4A5P29400 CYP4F35P-202ENST00000636121 390 ntBASIC6.8□□□□□ -1.32
COL4A5P29400 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL4A5P29400 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COL4A5P29400 AC119674.1-213ENST00000641177 1386 ntBASIC6.8□□□□□ -1.32
COL4A5P29400 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
COL4A5P29400 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL4A5P29400 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
COL4A5P29400 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL4A5P29400 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COL4A5P29400 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.79□□□□□ -1.32
COL4A5P29400 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
COL4A5P29400 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.79□□□□□ -1.32
COL4A5P29400 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.79□□□□□ -1.32
COL4A5P29400 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A5P29400 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A5P29400 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.79□□□□□ -1.32
COL4A5P29400 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A5P29400 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A5P29400 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
COL4A5P29400 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.79□□□□□ -1.32
COL4A5P29400 RNA5SP305-201ENST00000362665 119 ntBASIC6.79□□□□□ -1.32
COL4A5P29400 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
COL4A5P29400 OR4K12P-201ENST00000406538 961 ntBASIC6.79□□□□□ -1.32
COL4A5P29400 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.79□□□□□ -1.32
COL4A5P29400 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.79□□□□□ -1.32
COL4A5P29400 LDHAP2-201ENST00000437325 985 ntBASIC6.79□□□□□ -1.32
COL4A5P29400 AC079922.1-201ENST00000443291 359 ntBASIC6.79□□□□□ -1.32
COL4A5P29400 CEACAMP7-201ENST00000444105 496 ntBASIC6.79□□□□□ -1.32
COL4A5P29400 AC007686.1-201ENST00000488511 463 ntBASIC6.79□□□□□ -1.32
COL4A5P29400 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A5P29400 OR51K1P-201ENST00000510214 950 ntBASIC6.79□□□□□ -1.32
COL4A5P29400 OR51A1P-201ENST00000511110 946 ntBASIC6.79□□□□□ -1.32
COL4A5P29400 AC074255.1-201ENST00000511259 501 ntBASIC6.79□□□□□ -1.32
COL4A5P29400 CYP4F27P-201ENST00000514557 494 ntBASIC6.79□□□□□ -1.32
COL4A5P29400 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.79□□□□□ -1.32
COL4A5P29400 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.79□□□□□ -1.32
COL4A5P29400 MIR4330-201ENST00000579077 105 ntBASIC6.79□□□□□ -1.32
COL4A5P29400 MIR4311-201ENST00000580794 100 ntBASIC6.79□□□□□ -1.32
COL4A5P29400 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.79□□□□□ -1.32
COL4A5P29400 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.79□□□□□ -1.32
COL4A5P29400 AC012557.1-201ENST00000607115 611 ntBASIC6.79□□□□□ -1.32
COL4A5P29400 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.79□□□□□ -1.32
COL4A5P29400 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.79□□□□□ -1.32
COL4A5P29400 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
COL4A5P29400 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A5P29400 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
COL4A5P29400 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A5P29400 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A5P29400 MFSD8-216ENST00000641147 4009 ntBASIC6.79□□□□□ -1.32
COL4A5P29400 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL4A5P29400 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
COL4A5P29400 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A5P29400 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
COL4A5P29400 PWAR1-201ENST00000624188 2414 ntBASIC6.78□□□□□ -1.32
COL4A5P29400 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
COL4A5P29400 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A5P29400 RPL23AP18-201ENST00000416139 468 ntBASIC6.78□□□□□ -1.32
COL4A5P29400 AL360081.1-201ENST00000428299 555 ntBASIC6.78□□□□□ -1.32
COL4A5P29400 AC093890.1-201ENST00000502554 540 ntBASIC6.78□□□□□ -1.32
COL4A5P29400 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.78□□□□□ -1.32
COL4A5P29400 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.78□□□□□ -1.32
COL4A5P29400 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.78□□□□□ -1.32
COL4A5P29400 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.78□□□□□ -1.32
COL4A5P29400 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.78□□□□□ -1.32
COL4A5P29400 AC018552.1-201ENST00000562099 811 ntBASIC6.78□□□□□ -1.32
COL4A5P29400 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.78□□□□□ -1.32
COL4A5P29400 AC069307.1-201ENST00000602820 447 ntBASIC6.78□□□□□ -1.32
COL4A5P29400 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.78□□□□□ -1.32
COL4A5P29400 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
COL4A5P29400 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A5P29400 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
COL4A5P29400 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A5P29400 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
COL4A5P29400 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC6.78□□□□□ -1.32
COL4A5P29400 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A5P29400 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
COL4A5P29400 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
COL4A5P29400 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.78□□□□□ -1.32
COL4A5P29400 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC6.78□□□□□ -1.32
COL4A5P29400 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A5P29400 HSPA8P18-201ENST00000439846 1928 ntBASIC6.78□□□□□ -1.32
COL4A5P29400 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC6.78□□□□□ -1.32
COL4A5P29400 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL4A5P29400 RNU1-43P-201ENST00000365052 165 ntBASIC6.77□□□□□ -1.32
COL4A5P29400 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.77□□□□□ -1.32
COL4A5P29400 SNORA11-201ENST00000408789 128 ntBASIC6.77□□□□□ -1.32
COL4A5P29400 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
COL4A5P29400 AC090142.2-201ENST00000483263 416 ntBASIC6.77□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms