Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RPL12P12-201ENST00000424633 501 ntBASIC5.43□□□□□ -1.54
SHC1P29353 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.43□□□□□ -1.54
SHC1P29353 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SHC1P29353 RPL23AP60-201ENST00000450011 454 ntBASIC5.43□□□□□ -1.54
SHC1P29353 PPIAP27-201ENST00000453800 265 ntBASIC5.43□□□□□ -1.54
SHC1P29353 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.43□□□□□ -1.54
SHC1P29353 RAB28P2-201ENST00000454299 641 ntBASIC5.43□□□□□ -1.54
SHC1P29353 AC023194.2-201ENST00000465398 406 ntBASIC5.43□□□□□ -1.54
SHC1P29353 RN7SL352P-201ENST00000466002 277 ntBASIC5.43□□□□□ -1.54
SHC1P29353 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
SHC1P29353 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.43□□□□□ -1.54
SHC1P29353 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SHC1P29353 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.43□□□□□ -1.54
SHC1P29353 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.43□□□□□ -1.54
SHC1P29353 AC136777.2-201ENST00000522979 358 ntBASIC5.43□□□□□ -1.54
SHC1P29353 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SHC1P29353 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.43□□□□□ -1.54
SHC1P29353 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.43□□□□□ -1.54
SHC1P29353 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.43□□□□□ -1.54
SHC1P29353 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.43□□□□□ -1.54
SHC1P29353 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.43□□□□□ -1.54
SHC1P29353 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.43□□□□□ -1.54
SHC1P29353 AC025857.2-201ENST00000602711 238 ntBASIC5.43□□□□□ -1.54
SHC1P29353 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHC1P29353 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.43□□□□□ -1.54
SHC1P29353 AC096708.4-201ENST00000620563 552 ntBASIC5.43□□□□□ -1.54
SHC1P29353 AL136228.1-201ENST00000622221 319 ntBASIC5.43□□□□□ -1.54
SHC1P29353 AC025262.3-201ENST00000623666 360 ntBASIC5.43□□□□□ -1.54
SHC1P29353 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.43□□□□□ -1.54
SHC1P29353 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.43□□□□□ -1.54
SHC1P29353 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.43□□□□□ -1.54
SHC1P29353 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHC1P29353 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.43□□□□□ -1.54
SHC1P29353 AC232271.1-201ENST00000602455 2715 ntBASIC5.43□□□□□ -1.54
SHC1P29353 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.43□□□□□ -1.54
SHC1P29353 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.43□□□□□ -1.54
SHC1P29353 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHC1P29353 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHC1P29353 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHC1P29353 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SHC1P29353 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
SHC1P29353 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHC1P29353 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHC1P29353 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SHC1P29353 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SHC1P29353 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHC1P29353 NLRP3P1-201ENST00000622303 1785 ntBASIC5.42□□□□□ -1.54
SHC1P29353 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.42□□□□□ -1.54
SHC1P29353 AL591135.1-201ENST00000401578 5914 ntBASIC5.42□□□□□ -1.54
SHC1P29353 CAP1P2-201ENST00000417455 1409 ntBASIC5.42□□□□□ -1.54
SHC1P29353 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHC1P29353 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHC1P29353 RNA5SP433-201ENST00000364491 114 ntBASIC5.42□□□□□ -1.54
SHC1P29353 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.42□□□□□ -1.54
SHC1P29353 SNRPEP6-201ENST00000407465 277 ntBASIC5.42□□□□□ -1.54
SHC1P29353 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.42□□□□□ -1.54
SHC1P29353 RPL35AP3-201ENST00000414680 288 ntBASIC5.42□□□□□ -1.54
SHC1P29353 AL354868.1-201ENST00000417077 482 ntBASIC5.42□□□□□ -1.54
SHC1P29353 NMD3P2-201ENST00000421815 761 ntBASIC5.42□□□□□ -1.54
SHC1P29353 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.42□□□□□ -1.54
SHC1P29353 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.42□□□□□ -1.54
SHC1P29353 KRT8P51-201ENST00000438938 274 ntBASIC5.42□□□□□ -1.54
SHC1P29353 AL445466.1-201ENST00000448432 357 ntBASIC5.42□□□□□ -1.54
SHC1P29353 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHC1P29353 OSTCP1-201ENST00000455507 450 ntBASIC5.42□□□□□ -1.54
SHC1P29353 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.42□□□□□ -1.54
SHC1P29353 RN7SL269P-201ENST00000467795 305 ntBASIC5.42□□□□□ -1.54
SHC1P29353 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.42□□□□□ -1.54
SHC1P29353 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.42□□□□□ -1.54
SHC1P29353 RN7SL284P-201ENST00000498823 275 ntBASIC5.42□□□□□ -1.54
SHC1P29353 ST13P12-201ENST00000508958 1094 ntBASIC5.42□□□□□ -1.54
SHC1P29353 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.42□□□□□ -1.54
SHC1P29353 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.42□□□□□ -1.54
SHC1P29353 OR56A7P-201ENST00000524865 941 ntBASIC5.42□□□□□ -1.54
SHC1P29353 AC027369.2-201ENST00000528030 440 ntBASIC5.42□□□□□ -1.54
SHC1P29353 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SHC1P29353 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.42□□□□□ -1.54
SHC1P29353 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.42□□□□□ -1.54
SHC1P29353 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.42□□□□□ -1.54
SHC1P29353 MTATP6P25-201ENST00000574491 261 ntBASIC5.42□□□□□ -1.54
SHC1P29353 AC119403.2-201ENST00000590960 598 ntBASIC5.42□□□□□ -1.54
SHC1P29353 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.42□□□□□ -1.54
SHC1P29353 MIR6809-201ENST00000612189 116 ntBASIC5.42□□□□□ -1.54
SHC1P29353 AL359742.1-201ENST00000622497 540 ntBASIC5.42□□□□□ -1.54
SHC1P29353 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHC1P29353 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHC1P29353 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHC1P29353 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHC1P29353 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.42□□□□□ -1.54
SHC1P29353 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHC1P29353 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHC1P29353 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.41□□□□□ -1.54
SHC1P29353 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHC1P29353 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SHC1P29353 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHC1P29353 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.41□□□□□ -1.54
SHC1P29353 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.41□□□□□ -1.54
SHC1P29353 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHC1P29353 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHC1P29353 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms